Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 AL109936.8-201ENST00000641772 604 ntBASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DNAAF1Q8NEP3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
DNAAF1Q8NEP3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 AC055811.4-201ENST00000624039 1754 ntBASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 CICP8-201ENST00000455800 2813 ntBASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 AL139400.1-201ENST00000366220 510 ntBASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 AC027369.6-201ENST00000525520 931 ntBASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 TIMM17BP1-201ENST00000545713 516 ntBASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 AC004449.1-201ENST00000564240 433 ntBASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DNAAF1Q8NEP3 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
DNAAF1Q8NEP3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms