Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SRFBP1Q8NEF9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 AC026748.1-201ENST00000624349 3251 ntBASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 AC003102.2-201ENST00000589195 1469 ntBASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SRFBP1Q8NEF9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 BOLA2P3-201ENST00000404566 256 ntBASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 POM121L8P-201ENST00000417732 1281 ntBASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 POM121L9P-203ENST00000441984 1285 ntBASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 AC106886.1-201ENST00000568660 600 ntBASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SRFBP1Q8NEF9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 AL138725.1-201ENST00000407347 1314 ntBASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 GAPDHP21-201ENST00000450301 1010 ntBASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 GNRHR2-203ENST00000581100 1187 ntBASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 AC138466.3-201ENST00000619983 221 ntBASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRFBP1Q8NEF9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms