Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC092862.1-201ENST00000541534 533 ntBASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 TRMT112P3-201ENST00000580149 358 ntBASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 PHF23-213ENST00000613632 850 ntTSL 5 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 WASH7P-201ENST00000488147 1351 ntBASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.31□□□□□ -0.44
CCDC168Q8NDH2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 VENTXP4-201ENST00000449029 958 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AL451000.1-201ENST00000451300 1186 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 OR5BD1P-201ENST00000532527 817 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AC142086.5-202ENST00000562500 217 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AC006483.2-201ENST00000609813 515 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AC138969.2-201ENST00000532739 9932 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 JPT2-203ENST00000382711 894 ntTSL 4 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AC092612.1-201ENST00000514501 998 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AC254633.1-201ENST00000606790 345 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AP000322.3-201ENST00000608665 388 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AL022334.2-201ENST00000610000 484 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 MIR6720-201ENST00000611664 98 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 AC021305.1-201ENST00000520656 1514 ntBASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCDC168Q8NDH2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AC008536.3-201ENST00000623282 1599 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 TLE1P1-201ENST00000422965 589 ntBASIC12.29□□□□□ -0.44
CCDC168Q8NDH2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms