Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AC113367.3-201ENST00000508316 1912 ntBASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AC134312.5-201ENST00000568031 1313 ntBASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TTC9CQ8N5M4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TTC9CQ8N5M4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TTC9CQ8N5M4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TTC9CQ8N5M4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.83□□□□□ -0.51
TTC9CQ8N5M4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.83□□□□□ -0.51
TTC9CQ8N5M4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 AC007969.1-201ENST00000433675 447 ntBASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TTC9CQ8N5M4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 RN7SL752P-201ENST00000463779 287 ntBASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 TDH-203ENST00000531764 1110 ntBASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 AC010319.3-201ENST00000597028 470 ntBASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 AC025048.6-201ENST00000634326 1161 ntBASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TTC9CQ8N5M4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms