Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 RN7SKP230-201ENST00000365642 335 ntBASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 AL354989.2-201ENST00000435838 1540 ntBASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 AC113367.3-201ENST00000508316 1912 ntBASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 FAM45BP-202ENST00000592932 1624 ntBASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.3■□□□□ 0.04
ATPAF2Q8N5M1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AL136172.1-201ENST00000598590 1394 ntBASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 CROCCP4-201ENST00000457096 498 ntBASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AL391280.1-201ENST00000506969 1062 ntBASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AC078819.1-201ENST00000547454 765 ntBASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AC012085.1-201ENST00000548270 765 ntBASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AC106886.1-201ENST00000568660 600 ntBASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 AC092135.3-201ENST00000624151 1846 ntBASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.29■□□□□ 0.04
ATPAF2Q8N5M1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ATPAF2Q8N5M1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.28■□□□□ 0.04
ATPAF2Q8N5M1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF2Q8N5M1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ATPAF2Q8N5M1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.28■□□□□ 0.04
ATPAF2Q8N5M1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms