Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LYSMD2Q8IV50 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 AC024075.2-201ENST00000598112 1473 ntBASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 FAM220BP-201ENST00000377689 816 ntBASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 EMBP1-201ENST00000458200 901 ntBASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 KRT19P2-202ENST00000557173 1012 ntBASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 AL445228.2-201ENST00000605589 952 ntBASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LYSMD2Q8IV50 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 AC136604.1-202ENST00000425471 771 ntBASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 RNA5SP415-201ENST00000517246 115 ntBASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 AP002472.1-201ENST00000577490 586 ntBASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 AC116407.3-201ENST00000623905 1129 ntBASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.1□□□□□ -0.31
LYSMD2Q8IV50 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms