Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 AC007292.2-201ENST00000593524 1812 ntBASIC16.58■□□□□ 0.24
TRIM50Q86XT4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
TRIM50Q86XT4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 CICP23-201ENST00000605013 2741 ntBASIC16.57■□□□□ 0.24
TRIM50Q86XT4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 AC011742.3-201ENST00000439053 820 ntBASIC16.57■□□□□ 0.24
TRIM50Q86XT4 VDAC1P1-201ENST00000439229 848 ntBASIC16.57■□□□□ 0.24
TRIM50Q86XT4 GCOM2-201ENST00000509133 1104 ntBASIC16.57■□□□□ 0.24
TRIM50Q86XT4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 AL160314.3-201ENST00000556041 767 ntBASIC16.57■□□□□ 0.24
TRIM50Q86XT4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 AC106872.11-201ENST00000605838 421 ntBASIC16.57■□□□□ 0.24
TRIM50Q86XT4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 AC091812.3-201ENST00000621362 345 ntBASIC16.57■□□□□ 0.24
TRIM50Q86XT4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM50Q86XT4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 UPF3AP2-201ENST00000457924 1132 ntBASIC16.56■□□□□ 0.24
TRIM50Q86XT4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 MARK2P5-201ENST00000507649 634 ntBASIC16.56■□□□□ 0.24
TRIM50Q86XT4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AC131206.1-201ENST00000538078 1211 ntBASIC16.56■□□□□ 0.24
TRIM50Q86XT4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AC005962.1-201ENST00000584100 773 ntBASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AC008805.1-201ENST00000590892 364 ntBASIC16.56■□□□□ 0.24
TRIM50Q86XT4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM50Q86XT4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms