Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 HLA-J-204ENST00000495278 958 ntBASIC20.41■□□□□ 0.86
CDCA8Q53HL2 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 CSH2-206ENST00000560142 749 ntTSL 5 BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 AC015688.4-201ENST00000580780 1647 ntBASIC20.41■□□□□ 0.86
CDCA8Q53HL2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.41■□□□□ 0.86
CDCA8Q53HL2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 MARK2P5-201ENST00000507649 634 ntBASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AL160314.3-201ENST00000556041 767 ntBASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AC090164.2-201ENST00000611487 516 ntBASIC20.4■□□□□ 0.86
CDCA8Q53HL2 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 PCDHA3-202ENST00000532566 4594 ntBASIC20.4■□□□□ 0.86
CDCA8Q53HL2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDCA8Q53HL2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDCA8Q53HL2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDCA8Q53HL2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDCA8Q53HL2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDCA8Q53HL2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC20.39■□□□□ 0.86
CDCA8Q53HL2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDCA8Q53HL2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 CALR4P-201ENST00000431943 946 ntBASIC20.39■□□□□ 0.85
CDCA8Q53HL2 EIF4HP1-201ENST00000453115 687 ntBASIC20.39■□□□□ 0.85
CDCA8Q53HL2 AC104073.2-201ENST00000453737 312 ntBASIC20.39■□□□□ 0.85
CDCA8Q53HL2 AC022494.1-201ENST00000466044 728 ntBASIC20.39■□□□□ 0.85
CDCA8Q53HL2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 RBM8B-201ENST00000555532 525 ntBASIC20.39■□□□□ 0.85
CDCA8Q53HL2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 AC005962.1-201ENST00000584100 773 ntBASIC20.39■□□□□ 0.85
CDCA8Q53HL2 AC008805.1-201ENST00000590892 364 ntBASIC20.39■□□□□ 0.85
CDCA8Q53HL2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC20.39■□□□□ 0.85
CDCA8Q53HL2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms