Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTC1Q2NKJ3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTC1Q2NKJ3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTC1Q2NKJ3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.91■□□□□ 0.14
CTC1Q2NKJ3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTC1Q2NKJ3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CTC1Q2NKJ3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.91■□□□□ 0.14
CTC1Q2NKJ3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTC1Q2NKJ3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CTC1Q2NKJ3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTC1Q2NKJ3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 AL390755.1-201ENST00000623716 2027 ntBASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 AC078991.1-201ENST00000437297 610 ntBASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 RPL18P13-201ENST00000478088 569 ntBASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 AC100827.2-201ENST00000563214 1194 ntBASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 MIR4683-201ENST00000579659 81 ntBASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 MIR6756-201ENST00000616240 63 ntBASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 AC051619.9-201ENST00000623237 597 ntBASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 AC005912.2-201ENST00000619492 2400 ntBASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTC1Q2NKJ3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
CTC1Q2NKJ3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 DNM1P30-201ENST00000563586 452 ntBASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 SAMD11P1-201ENST00000571429 661 ntBASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 AC132192.2-201ENST00000596206 1147 ntBASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 AL136301.1-201ENST00000615830 422 ntBASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 YRDCP1-201ENST00000621419 643 ntBASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 NAP1L6-202ENST00000641404 1222 ntBASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 AC232323.1-201ENST00000540724 2099 ntBASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 REXO1L5P-201ENST00000622260 2098 ntBASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 AC055811.4-201ENST00000624039 1754 ntBASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTC1Q2NKJ3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms