Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 AC026470.1-201ENST00000478038 846 ntBASIC17.4■□□□□ 0.38
CNTNAP1P78357 AC023906.1-201ENST00000486386 453 ntBASIC17.4■□□□□ 0.38
CNTNAP1P78357 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 AC106047.2-201ENST00000511723 743 ntBASIC17.4■□□□□ 0.38
CNTNAP1P78357 RNA5SP417-201ENST00000516459 108 ntBASIC17.4■□□□□ 0.38
CNTNAP1P78357 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 AC010632.2-201ENST00000588369 1224 ntBASIC17.4■□□□□ 0.38
CNTNAP1P78357 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 AP005264.6-204ENST00000588436 719 ntBASIC17.4■□□□□ 0.38
CNTNAP1P78357 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 AC008894.3-201ENST00000624324 3103 ntBASIC17.4■□□□□ 0.38
CNTNAP1P78357 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.39■□□□□ 0.38
CNTNAP1P78357 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.39■□□□□ 0.38
CNTNAP1P78357 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CNTNAP1P78357 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.39■□□□□ 0.38
CNTNAP1P78357 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.39■□□□□ 0.37
CNTNAP1P78357 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 GUSBP10-201ENST00000417412 665 ntBASIC17.39■□□□□ 0.37
CNTNAP1P78357 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 AC002044.2-201ENST00000624910 970 ntBASIC17.39■□□□□ 0.37
CNTNAP1P78357 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP1P78357 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.39■□□□□ 0.37
CNTNAP1P78357 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.38■□□□□ 0.37
CNTNAP1P78357 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP1P78357 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CNTNAP1P78357 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.38■□□□□ 0.37
CNTNAP1P78357 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP1P78357 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CNTNAP1P78357 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP1P78357 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP1P78357 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP1P78357 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms