Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ACTA1P68133 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.34□□□□□ -0.27
ACTA1P68133 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.34□□□□□ -0.27
ACTA1P68133 CNN2P2-201ENST00000443536 909 ntBASIC13.34□□□□□ -0.27
ACTA1P68133 CNN2P3-201ENST00000450201 906 ntBASIC13.34□□□□□ -0.27
ACTA1P68133 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.34□□□□□ -0.27
ACTA1P68133 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
ACTA1P68133 TMEM198B-204ENST00000484016 896 ntBASIC13.34□□□□□ -0.27
ACTA1P68133 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.34□□□□□ -0.27
ACTA1P68133 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ACTA1P68133 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
ACTA1P68133 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.34□□□□□ -0.27
ACTA1P68133 AL136317.3-201ENST00000618497 906 ntBASIC13.34□□□□□ -0.27
ACTA1P68133 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.34□□□□□ -0.27
ACTA1P68133 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ACTA1P68133 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ACTA1P68133 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 AL138799.1-201ENST00000448213 1675 ntBASIC13.34□□□□□ -0.27
ACTA1P68133 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.33□□□□□ -0.27
ACTA1P68133 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ACTA1P68133 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
ACTA1P68133 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ACTA1P68133 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ACTA1P68133 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ACTA1P68133 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.33□□□□□ -0.28
ACTA1P68133 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ACTA1P68133 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.33□□□□□ -0.28
ACTA1P68133 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.33□□□□□ -0.28
ACTA1P68133 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.33□□□□□ -0.28
ACTA1P68133 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.33□□□□□ -0.28
ACTA1P68133 AC044860.1-202ENST00000559481 777 ntBASIC13.33□□□□□ -0.28
ACTA1P68133 MIR6074-201ENST00000612054 107 ntBASIC13.33□□□□□ -0.28
ACTA1P68133 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.33□□□□□ -0.28
ACTA1P68133 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.33□□□□□ -0.28
ACTA1P68133 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.33□□□□□ -0.28
ACTA1P68133 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.33□□□□□ -0.28
ACTA1P68133 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 AC011840.2-201ENST00000563063 1520 ntBASIC13.33□□□□□ -0.28
ACTA1P68133 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ACTA1P68133 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ACTA1P68133 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACTA1P68133 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACTA1P68133 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.32□□□□□ -0.28
ACTA1P68133 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ACTA1P68133 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ACTA1P68133 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.32□□□□□ -0.28
ACTA1P68133 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ACTA1P68133 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms