Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UBA52P62987 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 KRT8P12-202ENST00000472924 1397 ntBASIC12.99□□□□□ -0.33
UBA52P62987 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 AC079776.1-201ENST00000401540 1152 ntBASIC12.99□□□□□ -0.33
UBA52P62987 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.99□□□□□ -0.33
UBA52P62987 MEP1AP4-201ENST00000423244 1087 ntBASIC12.99□□□□□ -0.33
UBA52P62987 RPS2P32-201ENST00000439199 892 ntBASIC12.99□□□□□ -0.33
UBA52P62987 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 AC022494.1-201ENST00000466044 728 ntBASIC12.99□□□□□ -0.33
UBA52P62987 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 TPRX2P-201ENST00000535362 881 ntBASIC12.99□□□□□ -0.33
UBA52P62987 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.99□□□□□ -0.33
UBA52P62987 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.99□□□□□ -0.33
UBA52P62987 SRD5A3P1-201ENST00000603021 949 ntBASIC12.99□□□□□ -0.33
UBA52P62987 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.99□□□□□ -0.33
UBA52P62987 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 PEG13-201ENST00000631594 5667 ntBASIC12.99□□□□□ -0.33
UBA52P62987 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.98□□□□□ -0.33
UBA52P62987 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.98□□□□□ -0.33
UBA52P62987 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.98□□□□□ -0.33
UBA52P62987 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 AC113367.3-201ENST00000508316 1912 ntBASIC12.98□□□□□ -0.33
UBA52P62987 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
UBA52P62987 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UBA52P62987 MIR658-201ENST00000385210 100 ntBASIC12.98□□□□□ -0.33
UBA52P62987 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.98□□□□□ -0.33
UBA52P62987 AC112492.5-201ENST00000421897 457 ntBASIC12.98□□□□□ -0.33
UBA52P62987 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.98□□□□□ -0.33
UBA52P62987 TTTY23B-201ENST00000442790 549 ntBASIC12.98□□□□□ -0.33
UBA52P62987 AC093724.1-201ENST00000448659 1027 ntBASIC12.98□□□□□ -0.33
UBA52P62987 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.98□□□□□ -0.33
UBA52P62987 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBA52P62987 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.98□□□□□ -0.33
UBA52P62987 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.98□□□□□ -0.33
UBA52P62987 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.98□□□□□ -0.33
UBA52P62987 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms