Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP54P61011 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 REXO1L2P-201ENST00000425429 2069 ntBASIC14.74□□□□□ -0.05
SRP54P61011 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 AL354877.1-201ENST00000424412 413 ntBASIC14.74□□□□□ -0.05
SRP54P61011 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.74□□□□□ -0.05
SRP54P61011 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.74□□□□□ -0.05
SRP54P61011 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.74□□□□□ -0.05
SRP54P61011 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.74□□□□□ -0.05
SRP54P61011 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP54P61011 AL139099.5-201ENST00000635274 300 ntBASIC14.74□□□□□ -0.05
SRP54P61011 AC002472.3-201ENST00000640124 621 ntBASIC14.74□□□□□ -0.05
SRP54P61011 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 AC011840.2-201ENST00000563063 1520 ntBASIC14.74□□□□□ -0.05
SRP54P61011 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SRP54P61011 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SRP54P61011 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP54P61011 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP54P61011 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP54P61011 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.74□□□□□ -0.05
SRP54P61011 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SRP54P61011 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SRP54P61011 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SRP54P61011 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.73□□□□□ -0.05
SRP54P61011 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.73□□□□□ -0.05
SRP54P61011 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.73□□□□□ -0.05
SRP54P61011 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.73□□□□□ -0.05
SRP54P61011 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.73□□□□□ -0.05
SRP54P61011 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SRP54P61011 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.73□□□□□ -0.05
SRP54P61011 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 AC091804.1-201ENST00000486888 567 ntBASIC14.73□□□□□ -0.05
SRP54P61011 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.73□□□□□ -0.05
SRP54P61011 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.73□□□□□ -0.05
SRP54P61011 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.73□□□□□ -0.05
SRP54P61011 AL358472.3-201ENST00000608147 415 ntBASIC14.73□□□□□ -0.05
SRP54P61011 AL136301.1-201ENST00000615830 422 ntBASIC14.73□□□□□ -0.05
SRP54P61011 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 AC020910.5-201ENST00000623668 1865 ntBASIC14.73□□□□□ -0.05
SRP54P61011 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.73□□□□□ -0.05
SRP54P61011 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.73□□□□□ -0.05
SRP54P61011 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
SRP54P61011 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SRP54P61011 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.73□□□□□ -0.05
SRP54P61011 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SRP54P61011 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SRP54P61011 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SRP54P61011 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.72□□□□□ -0.05
SRP54P61011 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.72□□□□□ -0.05
SRP54P61011 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SRP54P61011 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.72□□□□□ -0.05
SRP54P61011 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SRP54P61011 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms