Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CMC4P56277 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 AC013726.1-201ENST00000563747 2285 ntBASIC11.1□□□□□ -0.63
CMC4P56277 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CMC4P56277 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.1□□□□□ -0.63
CMC4P56277 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CMC4P56277 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CMC4P56277 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
CMC4P56277 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CMC4P56277 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
CMC4P56277 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
CMC4P56277 AC018442.1-201ENST00000421439 2061 ntBASIC11.09□□□□□ -0.63
CMC4P56277 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.09□□□□□ -0.63
CMC4P56277 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CMC4P56277 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.09□□□□□ -0.63
CMC4P56277 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.09□□□□□ -0.63
CMC4P56277 GCOM2-201ENST00000509133 1104 ntBASIC11.09□□□□□ -0.63
CMC4P56277 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.09□□□□□ -0.63
CMC4P56277 C2orf69P2-201ENST00000562032 1123 ntBASIC11.09□□□□□ -0.63
CMC4P56277 PPY2P-201ENST00000582808 702 ntBASIC11.09□□□□□ -0.63
CMC4P56277 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.09□□□□□ -0.63
CMC4P56277 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.09□□□□□ -0.63
CMC4P56277 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CMC4P56277 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CMC4P56277 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.09□□□□□ -0.63
CMC4P56277 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CMC4P56277 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.08□□□□□ -0.64
CMC4P56277 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.08□□□□□ -0.64
CMC4P56277 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CMC4P56277 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
CMC4P56277 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.08□□□□□ -0.64
CMC4P56277 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CMC4P56277 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms