Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PDE1AP54750 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.13■□□□□ 0.49
PDE1AP54750 RN7SL713P-201ENST00000582127 302 ntBASIC18.13■□□□□ 0.49
PDE1AP54750 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.13■□□□□ 0.49
PDE1AP54750 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.13■□□□□ 0.49
PDE1AP54750 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 PCDHA3-202ENST00000532566 4594 ntBASIC18.13■□□□□ 0.49
PDE1AP54750 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE1AP54750 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE1AP54750 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC18.13■□□□□ 0.49
PDE1AP54750 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.13■□□□□ 0.49
PDE1AP54750 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE1AP54750 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE1AP54750 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDE1AP54750 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE1AP54750 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.12■□□□□ 0.49
PDE1AP54750 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDE1AP54750 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE1AP54750 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.12■□□□□ 0.49
PDE1AP54750 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.12■□□□□ 0.49
PDE1AP54750 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 KRT43P-201ENST00000434019 910 ntBASIC18.12■□□□□ 0.49
PDE1AP54750 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.12■□□□□ 0.49
PDE1AP54750 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.12■□□□□ 0.49
PDE1AP54750 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE1AP54750 COX5BP1-201ENST00000507622 393 ntBASIC18.12■□□□□ 0.49
PDE1AP54750 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.12■□□□□ 0.49
PDE1AP54750 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.12■□□□□ 0.49
PDE1AP54750 C2orf69P2-201ENST00000562032 1123 ntBASIC18.12■□□□□ 0.49
PDE1AP54750 AC106886.1-201ENST00000568660 600 ntBASIC18.12■□□□□ 0.49
PDE1AP54750 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE1AP54750 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.12■□□□□ 0.49
PDE1AP54750 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDE1AP54750 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.12■□□□□ 0.49
PDE1AP54750 AC002472.3-201ENST00000640124 621 ntBASIC18.12■□□□□ 0.49
PDE1AP54750 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDE1AP54750 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE1AP54750 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDE1AP54750 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE1AP54750 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 AL354989.2-201ENST00000435838 1540 ntBASIC18.12■□□□□ 0.49
PDE1AP54750 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.12■□□□□ 0.49
PDE1AP54750 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDE1AP54750 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PDE1AP54750 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.12■□□□□ 0.49
PDE1AP54750 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PDE1AP54750 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.12■□□□□ 0.49
PDE1AP54750 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDE1AP54750 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE1AP54750 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.11■□□□□ 0.49
PDE1AP54750 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PDE1AP54750 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
PDE1AP54750 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE1AP54750 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.11■□□□□ 0.49
PDE1AP54750 MIR1202-201ENST00000408529 83 ntBASIC18.11■□□□□ 0.49
PDE1AP54750 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.11■□□□□ 0.49
PDE1AP54750 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.11■□□□□ 0.49
PDE1AP54750 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.11■□□□□ 0.49
PDE1AP54750 RPL7P3-201ENST00000441388 714 ntBASIC18.11■□□□□ 0.49
PDE1AP54750 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PDE1AP54750 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.11■□□□□ 0.49
PDE1AP54750 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.11■□□□□ 0.49
PDE1AP54750 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE1AP54750 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE1AP54750 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDE1AP54750 AL358472.3-201ENST00000608147 415 ntBASIC18.11■□□□□ 0.49
PDE1AP54750 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.11■□□□□ 0.49
PDE1AP54750 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.11■□□□□ 0.49
PDE1AP54750 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDE1AP54750 AC136759.1-202ENST00000530858 2194 ntBASIC18.11■□□□□ 0.49
PDE1AP54750 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.11■□□□□ 0.49
PDE1AP54750 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms