Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
HMGA2P52926 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HMGA2P52926 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HMGA2P52926 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HMGA2P52926 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.58□□□□□ -0.23
HMGA2P52926 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.58□□□□□ -0.23
HMGA2P52926 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
HMGA2P52926 AC097376.2-205ENST00000610159 5334 ntBASIC13.58□□□□□ -0.23
HMGA2P52926 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HMGA2P52926 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.58□□□□□ -0.24
HMGA2P52926 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.58□□□□□ -0.24
HMGA2P52926 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.58□□□□□ -0.24
HMGA2P52926 INTS4P2-202ENST00000614726 2019 ntBASIC13.58□□□□□ -0.24
HMGA2P52926 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.58□□□□□ -0.24
HMGA2P52926 AC134915.1-201ENST00000426461 574 ntBASIC13.58□□□□□ -0.24
HMGA2P52926 DNAJB3-202ENST00000449667 1266 ntBASIC13.58□□□□□ -0.24
HMGA2P52926 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.58□□□□□ -0.24
HMGA2P52926 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
HMGA2P52926 AC023310.3-201ENST00000557027 670 ntBASIC13.58□□□□□ -0.24
HMGA2P52926 SORD2P-201ENST00000558556 1069 ntBASIC13.58□□□□□ -0.24
HMGA2P52926 AC100756.1-201ENST00000562736 682 ntBASIC13.58□□□□□ -0.24
HMGA2P52926 AC138749.3-201ENST00000567691 622 ntBASIC13.58□□□□□ -0.24
HMGA2P52926 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.58□□□□□ -0.24
HMGA2P52926 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.58□□□□□ -0.24
HMGA2P52926 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.58□□□□□ -0.24
HMGA2P52926 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.58□□□□□ -0.24
HMGA2P52926 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.58□□□□□ -0.24
HMGA2P52926 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.58□□□□□ -0.24
HMGA2P52926 BX088702.1-201ENST00000610784 235 ntBASIC13.58□□□□□ -0.24
HMGA2P52926 AC116165.1-201ENST00000611806 668 ntBASIC13.58□□□□□ -0.24
HMGA2P52926 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.58□□□□□ -0.24
HMGA2P52926 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.58□□□□□ -0.24
HMGA2P52926 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.58□□□□□ -0.24
HMGA2P52926 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.58□□□□□ -0.24
HMGA2P52926 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
HMGA2P52926 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.58□□□□□ -0.24
HMGA2P52926 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
HMGA2P52926 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.58□□□□□ -0.24
HMGA2P52926 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HMGA2P52926 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.58□□□□□ -0.24
HMGA2P52926 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HMGA2P52926 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGA2P52926 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
HMGA2P52926 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
HMGA2P52926 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGA2P52926 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
HMGA2P52926 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGA2P52926 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGA2P52926 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HMGA2P52926 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGA2P52926 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGA2P52926 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGA2P52926 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.57□□□□□ -0.24
HMGA2P52926 AC004890.2-204ENST00000481968 304 ntBASIC13.57□□□□□ -0.24
HMGA2P52926 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.57□□□□□ -0.24
HMGA2P52926 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.57□□□□□ -0.24
HMGA2P52926 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.57□□□□□ -0.24
HMGA2P52926 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms