Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
EFNA3P52797 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.93□□□□□ -0.18
EFNA3P52797 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.93□□□□□ -0.18
EFNA3P52797 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
EFNA3P52797 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.93□□□□□ -0.18
EFNA3P52797 TLE1P1-201ENST00000422965 589 ntBASIC13.93□□□□□ -0.18
EFNA3P52797 KLF2P1-201ENST00000447438 1042 ntBASIC13.93□□□□□ -0.18
EFNA3P52797 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.93□□□□□ -0.18
EFNA3P52797 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.93□□□□□ -0.18
EFNA3P52797 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.93□□□□□ -0.18
EFNA3P52797 FAM8A2P-201ENST00000528813 1142 ntBASIC13.93□□□□□ -0.18
EFNA3P52797 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.93□□□□□ -0.18
EFNA3P52797 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.93□□□□□ -0.18
EFNA3P52797 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.93□□□□□ -0.18
EFNA3P52797 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.93□□□□□ -0.18
EFNA3P52797 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.93□□□□□ -0.18
EFNA3P52797 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.93□□□□□ -0.18
EFNA3P52797 AC022748.3-201ENST00000621828 275 ntBASIC13.93□□□□□ -0.18
EFNA3P52797 AL162426.1-201ENST00000624141 743 ntBASIC13.93□□□□□ -0.18
EFNA3P52797 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
EFNA3P52797 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.93□□□□□ -0.18
EFNA3P52797 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
EFNA3P52797 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.93□□□□□ -0.18
EFNA3P52797 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.93□□□□□ -0.18
EFNA3P52797 SHC1P1-201ENST00000425230 1745 ntBASIC13.93□□□□□ -0.18
EFNA3P52797 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
EFNA3P52797 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EFNA3P52797 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
EFNA3P52797 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
EFNA3P52797 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 OR2I1P-209ENST00000641730 5365 ntBASIC13.92□□□□□ -0.18
EFNA3P52797 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNA3P52797 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNA3P52797 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.92□□□□□ -0.18
EFNA3P52797 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNA3P52797 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
EFNA3P52797 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.92□□□□□ -0.18
EFNA3P52797 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
EFNA3P52797 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.92□□□□□ -0.18
EFNA3P52797 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.92□□□□□ -0.18
EFNA3P52797 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.92□□□□□ -0.18
EFNA3P52797 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.92□□□□□ -0.18
EFNA3P52797 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.92□□□□□ -0.18
EFNA3P52797 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
EFNA3P52797 AL451050.2-201ENST00000606967 682 ntBASIC13.92□□□□□ -0.18
EFNA3P52797 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
EFNA3P52797 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 TNRC18P2-201ENST00000417666 2714 ntBASIC13.92□□□□□ -0.18
EFNA3P52797 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.92□□□□□ -0.18
EFNA3P52797 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.92□□□□□ -0.18
EFNA3P52797 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.92□□□□□ -0.18
EFNA3P52797 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
EFNA3P52797 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
EFNA3P52797 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms