Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB28P51157 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB28P51157 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RAB28P51157 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.36□□□□□ -0.11
RAB28P51157 AC010141.1-201ENST00000411585 623 ntBASIC14.36□□□□□ -0.11
RAB28P51157 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
RAB28P51157 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB28P51157 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB28P51157 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB28P51157 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB28P51157 AP001002.3-201ENST00000623482 206 ntBASIC14.36□□□□□ -0.11
RAB28P51157 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB28P51157 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB28P51157 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB28P51157 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB28P51157 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 SHC1P1-201ENST00000425230 1745 ntBASIC14.35□□□□□ -0.11
RAB28P51157 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB28P51157 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB28P51157 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 AC100850.1-201ENST00000506768 649 ntBASIC14.35□□□□□ -0.11
RAB28P51157 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB28P51157 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
RAB28P51157 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB28P51157 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.35□□□□□ -0.11
RAB28P51157 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB28P51157 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB28P51157 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB28P51157 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RAB28P51157 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB28P51157 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAB28P51157 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB28P51157 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms