Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.33□□□□□ -0.12
HLCSP50747 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
HLCSP50747 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.33□□□□□ -0.12
HLCSP50747 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.33□□□□□ -0.12
HLCSP50747 BTNL10-201ENST00000595971 695 ntBASIC14.33□□□□□ -0.12
HLCSP50747 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.33□□□□□ -0.12
HLCSP50747 RPSAP52-203ENST00000622976 1023 ntBASIC14.33□□□□□ -0.12
HLCSP50747 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HLCSP50747 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.33□□□□□ -0.12
HLCSP50747 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLCSP50747 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HLCSP50747 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.33□□□□□ -0.12
HLCSP50747 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 AC099521.3-201ENST00000624251 2938 ntBASIC14.32□□□□□ -0.12
HLCSP50747 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.32□□□□□ -0.12
HLCSP50747 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLCSP50747 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.32□□□□□ -0.12
HLCSP50747 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HLCSP50747 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLCSP50747 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.32□□□□□ -0.12
HLCSP50747 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.32□□□□□ -0.12
HLCSP50747 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HLCSP50747 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 AC009486.1-201ENST00000569860 813 ntBASIC14.32□□□□□ -0.12
HLCSP50747 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLCSP50747 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.32□□□□□ -0.12
HLCSP50747 AC093813.1-201ENST00000605066 256 ntBASIC14.32□□□□□ -0.12
HLCSP50747 AC017083.2-201ENST00000608069 979 ntBASIC14.32□□□□□ -0.12
HLCSP50747 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.32□□□□□ -0.12
HLCSP50747 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HLCSP50747 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
HLCSP50747 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLCSP50747 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
HLCSP50747 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLCSP50747 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLCSP50747 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLCSP50747 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLCSP50747 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.31□□□□□ -0.12
HLCSP50747 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLCSP50747 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLCSP50747 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HLCSP50747 COL6A4P2-202ENST00000504443 2753 ntBASIC14.31□□□□□ -0.12
HLCSP50747 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.31□□□□□ -0.12
HLCSP50747 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HLCSP50747 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLCSP50747 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.31□□□□□ -0.12
HLCSP50747 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.31□□□□□ -0.12
HLCSP50747 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLCSP50747 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLCSP50747 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLCSP50747 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.31□□□□□ -0.12
HLCSP50747 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.31□□□□□ -0.12
HLCSP50747 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLCSP50747 KRT43P-201ENST00000434019 910 ntBASIC14.31□□□□□ -0.12
HLCSP50747 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.31□□□□□ -0.12
HLCSP50747 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.31□□□□□ -0.12
HLCSP50747 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.31□□□□□ -0.12
HLCSP50747 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.31□□□□□ -0.12
HLCSP50747 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.31□□□□□ -0.12
HLCSP50747 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.31□□□□□ -0.12
HLCSP50747 TDH-203ENST00000531764 1110 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms