Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
CDKN2CP42773 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CDKN2CP42773 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2CP42773 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDKN2CP42773 SALL4P5-201ENST00000419001 1760 ntBASIC14.12□□□□□ -0.15
CDKN2CP42773 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDKN2CP42773 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2CP42773 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 KLF2P2-201ENST00000416807 1039 ntBASIC14.12□□□□□ -0.15
CDKN2CP42773 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKN2CP42773 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDKN2CP42773 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKN2CP42773 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.12□□□□□ -0.15
CDKN2CP42773 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2CP42773 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKN2CP42773 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKN2CP42773 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 AC004466.1-201ENST00000599515 1080 ntBASIC14.12□□□□□ -0.15
CDKN2CP42773 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 AC089987.1-201ENST00000551654 2209 ntBASIC14.12□□□□□ -0.15
CDKN2CP42773 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CDKN2CP42773 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.12□□□□□ -0.15
CDKN2CP42773 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2CP42773 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKN2CP42773 AC003102.2-201ENST00000589195 1469 ntBASIC14.12□□□□□ -0.15
CDKN2CP42773 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKN2CP42773 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKN2CP42773 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2CP42773 SLC7A15P-201ENST00000424028 1363 ntBASIC14.11□□□□□ -0.15
CDKN2CP42773 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CDKN2CP42773 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2CP42773 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2CP42773 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDKN2CP42773 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDKN2CP42773 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2CP42773 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2CP42773 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 AC098850.1-201ENST00000419919 790 ntBASIC14.11□□□□□ -0.15
CDKN2CP42773 MEP1AP4-201ENST00000423244 1087 ntBASIC14.11□□□□□ -0.15
CDKN2CP42773 BASP1P1-201ENST00000430708 665 ntBASIC14.11□□□□□ -0.15
CDKN2CP42773 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.11□□□□□ -0.15
CDKN2CP42773 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDKN2CP42773 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKN2CP42773 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKN2CP42773 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.11□□□□□ -0.15
CDKN2CP42773 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDKN2CP42773 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms