Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 AP001267.2-201ENST00000532619 2086 ntBASIC14.8□□□□□ -0.04
HMGCLP35914 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HMGCLP35914 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HMGCLP35914 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.8□□□□□ -0.04
HMGCLP35914 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGCLP35914 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 AC010141.1-201ENST00000411585 623 ntBASIC14.8□□□□□ -0.04
HMGCLP35914 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGCLP35914 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.8□□□□□ -0.04
HMGCLP35914 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.8□□□□□ -0.04
HMGCLP35914 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGCLP35914 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGCLP35914 AP006547.1-201ENST00000563435 692 ntBASIC14.8□□□□□ -0.04
HMGCLP35914 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGCLP35914 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGCLP35914 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.8□□□□□ -0.04
HMGCLP35914 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGCLP35914 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HMGCLP35914 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HMGCLP35914 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGCLP35914 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGCLP35914 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCLP35914 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCLP35914 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCLP35914 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCLP35914 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.79□□□□□ -0.04
HMGCLP35914 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HMGCLP35914 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 FAM21FP-201ENST00000426241 1131 ntBASIC14.79□□□□□ -0.04
HMGCLP35914 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.79□□□□□ -0.04
HMGCLP35914 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 AC022447.6-201ENST00000515522 438 ntBASIC14.79□□□□□ -0.04
HMGCLP35914 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.79□□□□□ -0.04
HMGCLP35914 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HMGCLP35914 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCLP35914 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.79□□□□□ -0.04
HMGCLP35914 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCLP35914 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HMGCLP35914 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.79□□□□□ -0.04
HMGCLP35914 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HMGCLP35914 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCLP35914 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGCLP35914 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGCLP35914 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 AC005912.2-201ENST00000619492 2400 ntBASIC14.78□□□□□ -0.04
HMGCLP35914 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.78□□□□□ -0.04
HMGCLP35914 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 AL023775.1-201ENST00000454907 1746 ntBASIC14.78□□□□□ -0.04
HMGCLP35914 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms