Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.97■□□□□ 0.31
COPB2P35606 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
COPB2P35606 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.97■□□□□ 0.31
COPB2P35606 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.97■□□□□ 0.31
COPB2P35606 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPB2P35606 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.97■□□□□ 0.31
COPB2P35606 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COPB2P35606 AC023090.2-201ENST00000625182 2110 ntBASIC16.97■□□□□ 0.31
COPB2P35606 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.97■□□□□ 0.31
COPB2P35606 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COPB2P35606 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COPB2P35606 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPB2P35606 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.97■□□□□ 0.31
COPB2P35606 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COPB2P35606 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COPB2P35606 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.97■□□□□ 0.31
COPB2P35606 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPB2P35606 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.97■□□□□ 0.31
COPB2P35606 C8orf49-201ENST00000525043 1968 ntBASIC16.97■□□□□ 0.31
COPB2P35606 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.96■□□□□ 0.31
COPB2P35606 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
COPB2P35606 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.96■□□□□ 0.31
COPB2P35606 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.96■□□□□ 0.31
COPB2P35606 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
COPB2P35606 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
COPB2P35606 AL359258.3-201ENST00000622910 2331 ntBASIC16.96■□□□□ 0.31
COPB2P35606 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.96■□□□□ 0.31
COPB2P35606 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.96■□□□□ 0.31
COPB2P35606 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.96■□□□□ 0.31
COPB2P35606 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.96■□□□□ 0.31
COPB2P35606 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COPB2P35606 AC242376.1-201ENST00000559033 726 ntBASIC16.96■□□□□ 0.31
COPB2P35606 MIR4754-201ENST00000582477 89 ntBASIC16.96■□□□□ 0.31
COPB2P35606 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.96■□□□□ 0.31
COPB2P35606 AL133499.1-201ENST00000596207 608 ntBASIC16.96■□□□□ 0.31
COPB2P35606 AF254983.2-201ENST00000612331 135 ntBASIC16.96■□□□□ 0.31
COPB2P35606 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.96■□□□□ 0.31
COPB2P35606 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.96■□□□□ 0.31
COPB2P35606 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.96■□□□□ 0.31
COPB2P35606 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPB2P35606 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
COPB2P35606 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.96■□□□□ 0.3
COPB2P35606 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COPB2P35606 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COPB2P35606 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COPB2P35606 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.96■□□□□ 0.3
COPB2P35606 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.96■□□□□ 0.3
COPB2P35606 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COPB2P35606 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.95■□□□□ 0.3
COPB2P35606 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
COPB2P35606 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 AC068587.6-202ENST00000641839 5619 ntBASIC16.95■□□□□ 0.3
COPB2P35606 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COPB2P35606 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COPB2P35606 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
COPB2P35606 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COPB2P35606 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.95■□□□□ 0.3
COPB2P35606 RPS2P36-201ENST00000456516 831 ntBASIC16.95■□□□□ 0.3
COPB2P35606 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.95■□□□□ 0.3
COPB2P35606 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.95■□□□□ 0.3
COPB2P35606 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.95■□□□□ 0.3
COPB2P35606 MIR4706-201ENST00000582134 82 ntBASIC16.95■□□□□ 0.3
COPB2P35606 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.95■□□□□ 0.3
COPB2P35606 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPB2P35606 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
COPB2P35606 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.95■□□□□ 0.3
COPB2P35606 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms