Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.67■□□□□ 0.74
USP6P35125 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP6P35125 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.67■□□□□ 0.74
USP6P35125 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP6P35125 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP6P35125 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.67■□□□□ 0.74
USP6P35125 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
USP6P35125 LINC00554-201ENST00000564841 3011 ntBASIC19.67■□□□□ 0.74
USP6P35125 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC19.67■□□□□ 0.74
USP6P35125 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP6P35125 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC19.67■□□□□ 0.74
USP6P35125 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC19.67■□□□□ 0.74
USP6P35125 PTK2-225ENST00000520892 571 ntTSL 4 BASIC19.67■□□□□ 0.74
USP6P35125 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.67■□□□□ 0.74
USP6P35125 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.67■□□□□ 0.74
USP6P35125 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
USP6P35125 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.67■□□□□ 0.74
USP6P35125 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
USP6P35125 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
USP6P35125 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP6P35125 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6P35125 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP6P35125 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
USP6P35125 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC19.66■□□□□ 0.74
USP6P35125 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6P35125 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP6P35125 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.66■□□□□ 0.74
USP6P35125 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6P35125 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.66■□□□□ 0.74
USP6P35125 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
USP6P35125 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP6P35125 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC19.66■□□□□ 0.74
USP6P35125 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6P35125 AL161932.2-201ENST00000435436 679 ntBASIC19.66■□□□□ 0.74
USP6P35125 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC19.66■□□□□ 0.74
USP6P35125 AC026410.1-201ENST00000507366 1101 ntBASIC19.66■□□□□ 0.74
USP6P35125 RNA5SP417-201ENST00000516459 108 ntBASIC19.66■□□□□ 0.74
USP6P35125 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC19.66■□□□□ 0.74
USP6P35125 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.66■□□□□ 0.74
USP6P35125 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
USP6P35125 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC19.66■□□□□ 0.74
USP6P35125 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC19.66■□□□□ 0.74
USP6P35125 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC19.66■□□□□ 0.74
USP6P35125 SIGLEC22P-201ENST00000599104 714 ntBASIC19.66■□□□□ 0.74
USP6P35125 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.66■□□□□ 0.74
USP6P35125 AC021016.3-201ENST00000608367 477 ntBASIC19.66■□□□□ 0.74
USP6P35125 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.66■□□□□ 0.74
USP6P35125 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP6P35125 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC19.66■□□□□ 0.74
USP6P35125 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP6P35125 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
USP6P35125 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP6P35125 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP6P35125 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.65■□□□□ 0.74
USP6P35125 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP6P35125 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
USP6P35125 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.65■□□□□ 0.74
USP6P35125 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 AJ011931.1-201ENST00000618749 2492 ntBASIC19.65■□□□□ 0.74
USP6P35125 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 AC105917.1-201ENST00000506637 2539 ntBASIC19.65■□□□□ 0.74
USP6P35125 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.65■□□□□ 0.74
USP6P35125 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC19.65■□□□□ 0.74
USP6P35125 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
USP6P35125 AC092638.2-201ENST00000441105 947 ntBASIC19.65■□□□□ 0.74
USP6P35125 DPY19L2P5-201ENST00000456300 331 ntBASIC19.65■□□□□ 0.74
USP6P35125 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 SORD2P-201ENST00000558556 1069 ntBASIC19.65■□□□□ 0.74
USP6P35125 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19.65■□□□□ 0.74
USP6P35125 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC19.65■□□□□ 0.74
USP6P35125 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.65■□□□□ 0.74
USP6P35125 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC19.65■□□□□ 0.74
USP6P35125 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
USP6P35125 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP6P35125 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms