Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A4P31645 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC6A4P31645 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC6A4P31645 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC6A4P31645 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 BNIP3P13-201ENST00000599968 566 ntBASIC15.23■□□□□ 0.03
SLC6A4P31645 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC6A4P31645 AC027601.3-201ENST00000622907 509 ntBASIC15.23■□□□□ 0.03
SLC6A4P31645 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC6A4P31645 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC6A4P31645 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A4P31645 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A4P31645 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC6A4P31645 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
SLC6A4P31645 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A4P31645 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A4P31645 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC6A4P31645 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A4P31645 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A4P31645 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC6A4P31645 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC6A4P31645 AC005324.6-201ENST00000587972 613 ntBASIC15.22■□□□□ 0.03
SLC6A4P31645 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.22■□□□□ 0.03
SLC6A4P31645 Z98259.2-201ENST00000641583 609 ntBASIC15.22■□□□□ 0.03
SLC6A4P31645 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 AL590440.2-201ENST00000641973 1595 ntBASIC15.22■□□□□ 0.03
SLC6A4P31645 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SLC6A4P31645 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A4P31645 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 NORAD-201ENST00000565493 5339 ntBASIC15.22■□□□□ 0.03
SLC6A4P31645 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLC6A4P31645 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC6A4P31645 CICP24-201ENST00000605464 2705 ntBASIC15.22■□□□□ 0.03
SLC6A4P31645 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A4P31645 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SLC6A4P31645 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SLC6A4P31645 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC6A4P31645 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC6A4P31645 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 AC004899.1-201ENST00000424687 1714 ntBASIC15.21■□□□□ 0.03
SLC6A4P31645 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC6A4P31645 AC091804.1-201ENST00000486888 567 ntBASIC15.21■□□□□ 0.03
SLC6A4P31645 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC6A4P31645 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC6A4P31645 AL023803.2-201ENST00000620080 638 ntBASIC15.21■□□□□ 0.03
SLC6A4P31645 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A4P31645 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC6A4P31645 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms