Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC18.94■□□□□ 0.62
RXRBP28702 RN7SL788P-201ENST00000460504 316 ntBASIC18.94■□□□□ 0.62
RXRBP28702 RPSAP70-201ENST00000504462 864 ntBASIC18.94■□□□□ 0.62
RXRBP28702 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC18.94■□□□□ 0.62
RXRBP28702 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC18.94■□□□□ 0.62
RXRBP28702 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC18.94■□□□□ 0.62
RXRBP28702 AC022001.3-201ENST00000606330 596 ntBASIC18.94■□□□□ 0.62
RXRBP28702 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.94■□□□□ 0.62
RXRBP28702 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RXRBP28702 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RXRBP28702 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RXRBP28702 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RXRBP28702 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RXRBP28702 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RXRBP28702 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RXRBP28702 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RXRBP28702 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.94■□□□□ 0.62
RXRBP28702 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RXRBP28702 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RXRBP28702 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RXRBP28702 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RXRBP28702 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RXRBP28702 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RXRBP28702 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RXRBP28702 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RXRBP28702 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RXRBP28702 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RXRBP28702 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC18.93■□□□□ 0.62
RXRBP28702 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RXRBP28702 AL121753.2-201ENST00000624581 1461 ntBASIC18.93■□□□□ 0.62
RXRBP28702 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RXRBP28702 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RXRBP28702 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RXRBP28702 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC18.93■□□□□ 0.62
RXRBP28702 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.93■□□□□ 0.62
RXRBP28702 AC022121.1-201ENST00000484584 579 ntBASIC18.93■□□□□ 0.62
RXRBP28702 RN7SL87P-201ENST00000497657 288 ntBASIC18.93■□□□□ 0.62
RXRBP28702 AC099328.1-201ENST00000498809 1030 ntBASIC18.93■□□□□ 0.62
RXRBP28702 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.93■□□□□ 0.62
RXRBP28702 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC18.93■□□□□ 0.62
RXRBP28702 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC18.93■□□□□ 0.62
RXRBP28702 IFNL3P1-201ENST00000595082 501 ntBASIC18.93■□□□□ 0.62
RXRBP28702 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RXRBP28702 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RXRBP28702 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RXRBP28702 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
RXRBP28702 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RXRBP28702 LILRP2-202ENST00000413572 1383 ntBASIC18.93■□□□□ 0.62
RXRBP28702 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.93■□□□□ 0.62
RXRBP28702 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RXRBP28702 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RXRBP28702 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC18.92■□□□□ 0.62
RXRBP28702 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RXRBP28702 AC133141.1-201ENST00000443015 339 ntBASIC18.92■□□□□ 0.62
RXRBP28702 NALT1-202ENST00000450304 437 ntTSL 3 BASIC18.92■□□□□ 0.62
RXRBP28702 BATF-202ENST00000555504 361 ntTSL 2 BASIC18.92■□□□□ 0.62
RXRBP28702 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.92■□□□□ 0.62
RXRBP28702 AC010531.8-201ENST00000623341 685 ntBASIC18.92■□□□□ 0.62
RXRBP28702 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RXRBP28702 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
RXRBP28702 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RXRBP28702 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RXRBP28702 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 AC023090.2-201ENST00000625182 2110 ntBASIC18.91■□□□□ 0.62
RXRBP28702 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RXRBP28702 FAM86FP-201ENST00000338711 969 ntBASIC18.91■□□□□ 0.62
RXRBP28702 MIR1226-201ENST00000408658 75 ntBASIC18.91■□□□□ 0.62
RXRBP28702 LINC00265-2P-201ENST00000413372 782 ntBASIC18.91■□□□□ 0.62
RXRBP28702 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC18.91■□□□□ 0.62
RXRBP28702 OR4C14P-201ENST00000440929 923 ntBASIC18.91■□□□□ 0.62
RXRBP28702 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC18.91■□□□□ 0.62
RXRBP28702 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms