Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.52□□□□□ -0.25
GDF1P27539 POM121L10P-201ENST00000436994 1285 ntBASIC13.52□□□□□ -0.25
GDF1P27539 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.52□□□□□ -0.25
GDF1P27539 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
GDF1P27539 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDF1P27539 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDF1P27539 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.52□□□□□ -0.25
GDF1P27539 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.52□□□□□ -0.25
GDF1P27539 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.52□□□□□ -0.25
GDF1P27539 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.52□□□□□ -0.25
GDF1P27539 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.52□□□□□ -0.25
GDF1P27539 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDF1P27539 AL358472.3-201ENST00000608147 415 ntBASIC13.52□□□□□ -0.25
GDF1P27539 AC244093.1-201ENST00000610837 814 ntBASIC13.52□□□□□ -0.25
GDF1P27539 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDF1P27539 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.52□□□□□ -0.25
GDF1P27539 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.52□□□□□ -0.25
GDF1P27539 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GDF1P27539 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDF1P27539 AC126177.1-201ENST00000547829 2218 ntBASIC13.52□□□□□ -0.25
GDF1P27539 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
GDF1P27539 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDF1P27539 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.52□□□□□ -0.25
GDF1P27539 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
GDF1P27539 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.52□□□□□ -0.25
GDF1P27539 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
GDF1P27539 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.51□□□□□ -0.25
GDF1P27539 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.51□□□□□ -0.25
GDF1P27539 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.51□□□□□ -0.25
GDF1P27539 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
GDF1P27539 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.51□□□□□ -0.25
GDF1P27539 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.51□□□□□ -0.25
GDF1P27539 AC021723.1-201ENST00000486306 515 ntBASIC13.51□□□□□ -0.25
GDF1P27539 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.51□□□□□ -0.25
GDF1P27539 AP001258.2-201ENST00000529891 490 ntBASIC13.51□□□□□ -0.25
GDF1P27539 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.51□□□□□ -0.25
GDF1P27539 AC007663.3-201ENST00000609632 465 ntBASIC13.51□□□□□ -0.25
GDF1P27539 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
GDF1P27539 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.51□□□□□ -0.25
GDF1P27539 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GDF1P27539 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
GDF1P27539 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.5□□□□□ -0.25
GDF1P27539 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 SBF1P1-201ENST00000444527 5631 ntBASIC13.5□□□□□ -0.25
GDF1P27539 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 TCAF2P1-201ENST00000291129 2421 ntBASIC13.5□□□□□ -0.25
GDF1P27539 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms