Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN3P26045 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN3P26045 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.19■□□□□ 0.02
PTPN3P26045 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
PTPN3P26045 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.19■□□□□ 0.02
PTPN3P26045 TPM3P8-201ENST00000330554 643 ntBASIC15.19■□□□□ 0.02
PTPN3P26045 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PTPN3P26045 NME2P1-201ENST00000426182 414 ntBASIC15.19■□□□□ 0.02
PTPN3P26045 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.19■□□□□ 0.02
PTPN3P26045 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.19■□□□□ 0.02
PTPN3P26045 AL590640.2-201ENST00000457038 527 ntBASIC15.19■□□□□ 0.02
PTPN3P26045 FTH1P14-201ENST00000482930 551 ntBASIC15.19■□□□□ 0.02
PTPN3P26045 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN3P26045 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.19■□□□□ 0.02
PTPN3P26045 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.19■□□□□ 0.02
PTPN3P26045 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN3P26045 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.19■□□□□ 0.02
PTPN3P26045 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.19■□□□□ 0.02
PTPN3P26045 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.19■□□□□ 0.02
PTPN3P26045 BTNL10-201ENST00000595971 695 ntBASIC15.19■□□□□ 0.02
PTPN3P26045 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN3P26045 AL022328.1-201ENST00000610050 478 ntBASIC15.19■□□□□ 0.02
PTPN3P26045 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN3P26045 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN3P26045 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PTPN3P26045 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PTPN3P26045 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN3P26045 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN3P26045 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN3P26045 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN3P26045 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PTPN3P26045 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PTPN3P26045 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
PTPN3P26045 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.18■□□□□ 0.02
PTPN3P26045 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
PTPN3P26045 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.18■□□□□ 0.02
PTPN3P26045 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.18■□□□□ 0.02
PTPN3P26045 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.18■□□□□ 0.02
PTPN3P26045 AC106820.3-201ENST00000561653 397 ntBASIC15.18■□□□□ 0.02
PTPN3P26045 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.18■□□□□ 0.02
PTPN3P26045 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PTPN3P26045 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN3P26045 AC244669.2-201ENST00000612320 853 ntBASIC15.18■□□□□ 0.02
PTPN3P26045 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
PTPN3P26045 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN3P26045 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN3P26045 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PTPN3P26045 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.18■□□□□ 0.02
PTPN3P26045 AC009093.2-202ENST00000620513 2079 ntBASIC15.18■□□□□ 0.02
PTPN3P26045 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.18■□□□□ 0.02
PTPN3P26045 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PTPN3P26045 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
PTPN3P26045 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTPN3P26045 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN3P26045 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 AP000593.2-201ENST00000542775 1433 ntBASIC15.17■□□□□ 0.02
PTPN3P26045 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PTPN3P26045 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.17■□□□□ 0.02
PTPN3P26045 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTPN3P26045 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms