Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.83□□□□□ -0.36
CD40P25942 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CD40P25942 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 FNTAP2-201ENST00000430308 634 ntBASIC12.83□□□□□ -0.36
CD40P25942 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.83□□□□□ -0.36
CD40P25942 CALR4P-201ENST00000431943 946 ntBASIC12.83□□□□□ -0.36
CD40P25942 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.83□□□□□ -0.36
CD40P25942 BX284668.4-201ENST00000453917 508 ntBASIC12.83□□□□□ -0.36
CD40P25942 RNMTL1P1-201ENST00000454103 560 ntBASIC12.83□□□□□ -0.36
CD40P25942 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.83□□□□□ -0.36
CD40P25942 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.83□□□□□ -0.36
CD40P25942 AC005740.2-201ENST00000511085 419 ntBASIC12.83□□□□□ -0.36
CD40P25942 AC044849.1-201ENST00000519737 1188 ntBASIC12.83□□□□□ -0.36
CD40P25942 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.83□□□□□ -0.36
CD40P25942 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 AC132192.2-201ENST00000596206 1147 ntBASIC12.83□□□□□ -0.36
CD40P25942 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.83□□□□□ -0.36
CD40P25942 AC023157.3-201ENST00000619086 2088 ntBASIC12.83□□□□□ -0.36
CD40P25942 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.83□□□□□ -0.36
CD40P25942 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
CD40P25942 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.83□□□□□ -0.36
CD40P25942 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.83□□□□□ -0.36
CD40P25942 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CD40P25942 AC092384.3-202ENST00000564646 2873 ntBASIC12.83□□□□□ -0.36
CD40P25942 LINC01101-201ENST00000622953 1884 ntBASIC12.82□□□□□ -0.36
CD40P25942 AC011270.2-201ENST00000624293 2550 ntBASIC12.82□□□□□ -0.36
CD40P25942 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.82□□□□□ -0.36
CD40P25942 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.82□□□□□ -0.36
CD40P25942 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CD40P25942 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CD40P25942 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CD40P25942 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.82□□□□□ -0.36
CD40P25942 NKAIN1P1-201ENST00000435754 582 ntBASIC12.82□□□□□ -0.36
CD40P25942 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.82□□□□□ -0.36
CD40P25942 EIF4HP1-201ENST00000453115 687 ntBASIC12.82□□□□□ -0.36
CD40P25942 AC106794.1-201ENST00000506935 792 ntBASIC12.82□□□□□ -0.36
CD40P25942 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.82□□□□□ -0.36
CD40P25942 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.82□□□□□ -0.36
CD40P25942 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 MIR4783-201ENST00000580343 82 ntBASIC12.82□□□□□ -0.36
CD40P25942 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 RN7SL163P-201ENST00000583100 276 ntBASIC12.82□□□□□ -0.36
CD40P25942 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.82□□□□□ -0.36
CD40P25942 BNIP3P13-201ENST00000599968 566 ntBASIC12.82□□□□□ -0.36
CD40P25942 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.82□□□□□ -0.36
CD40P25942 AC138649.2-201ENST00000615886 705 ntBASIC12.82□□□□□ -0.36
CD40P25942 AC022748.3-201ENST00000621828 275 ntBASIC12.82□□□□□ -0.36
CD40P25942 AC007292.2-201ENST00000593524 1812 ntBASIC12.82□□□□□ -0.36
CD40P25942 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.82□□□□□ -0.36
CD40P25942 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
CD40P25942 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.82□□□□□ -0.36
CD40P25942 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
CD40P25942 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CD40P25942 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.82□□□□□ -0.36
CD40P25942 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CD40P25942 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.81□□□□□ -0.36
CD40P25942 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.81□□□□□ -0.36
CD40P25942 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms