Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 AC011840.2-201ENST00000563063 1520 ntBASIC16.04■□□□□ 0.16
CD58P19256 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD58P19256 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.04■□□□□ 0.16
CD58P19256 AC003102.2-201ENST00000589195 1469 ntBASIC16.03■□□□□ 0.16
CD58P19256 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CD58P19256 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.03■□□□□ 0.16
CD58P19256 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CD58P19256 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.03■□□□□ 0.16
CD58P19256 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.03■□□□□ 0.16
CD58P19256 FKBP4P6-201ENST00000457486 1332 ntBASIC16.03■□□□□ 0.16
CD58P19256 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CD58P19256 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.03■□□□□ 0.16
CD58P19256 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CD58P19256 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CD58P19256 BOLA2P3-201ENST00000404566 256 ntBASIC16.03■□□□□ 0.16
CD58P19256 MIR1202-201ENST00000408529 83 ntBASIC16.03■□□□□ 0.16
CD58P19256 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.03■□□□□ 0.16
CD58P19256 RPL7P3-201ENST00000441388 714 ntBASIC16.03■□□□□ 0.16
CD58P19256 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.03■□□□□ 0.16
CD58P19256 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.03■□□□□ 0.16
CD58P19256 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.03■□□□□ 0.16
CD58P19256 MIR6775-201ENST00000617557 69 ntBASIC16.03■□□□□ 0.16
CD58P19256 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.03■□□□□ 0.16
CD58P19256 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
CD58P19256 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD58P19256 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CD58P19256 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.03■□□□□ 0.16
CD58P19256 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.02■□□□□ 0.16
CD58P19256 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.02■□□□□ 0.16
CD58P19256 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.02■□□□□ 0.16
CD58P19256 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.02■□□□□ 0.16
CD58P19256 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CD58P19256 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.02■□□□□ 0.16
CD58P19256 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.02■□□□□ 0.16
CD58P19256 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.02■□□□□ 0.16
CD58P19256 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CD58P19256 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.02■□□□□ 0.16
CD58P19256 ARSEP1-201ENST00000420443 635 ntBASIC16.02■□□□□ 0.16
CD58P19256 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.02■□□□□ 0.16
CD58P19256 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CD58P19256 MESTP3-201ENST00000503460 968 ntBASIC16.02■□□□□ 0.16
CD58P19256 FTLP10-202ENST00000505798 471 ntBASIC16.02■□□□□ 0.16
CD58P19256 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.02■□□□□ 0.16
CD58P19256 AC104989.1-201ENST00000519711 778 ntBASIC16.02■□□□□ 0.16
CD58P19256 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.02■□□□□ 0.16
CD58P19256 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.02■□□□□ 0.16
CD58P19256 OR10B1P-201ENST00000601666 907 ntBASIC16.02■□□□□ 0.16
CD58P19256 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.02■□□□□ 0.16
CD58P19256 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.02■□□□□ 0.16
CD58P19256 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD58P19256 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD58P19256 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD58P19256 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.02■□□□□ 0.15
CD58P19256 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.02■□□□□ 0.15
CD58P19256 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD58P19256 AC140479.7-201ENST00000636301 2332 ntBASIC16.02■□□□□ 0.15
CD58P19256 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD58P19256 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD58P19256 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD58P19256 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD58P19256 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD58P19256 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms