Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL3L1P16619 MIR6775-201ENST00000617557 69 ntBASIC12.33□□□□□ -0.44
CCL3L1P16619 RHOXF1P1-202ENST00000635473 501 ntBASIC12.33□□□□□ -0.44
CCL3L1P16619 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL3L1P16619 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL3L1P16619 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL3L1P16619 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3L1P16619 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3L1P16619 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3L1P16619 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3L1P16619 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.33□□□□□ -0.44
CCL3L1P16619 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
CCL3L1P16619 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3L1P16619 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL3L1P16619 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3L1P16619 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL3L1P16619 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CCL3L1P16619 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3L1P16619 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CCL3L1P16619 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CCL3L1P16619 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL3L1P16619 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL3L1P16619 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL3L1P16619 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3L1P16619 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CCL3L1P16619 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 RN7SKP230-201ENST00000365642 335 ntBASIC12.32□□□□□ -0.44
CCL3L1P16619 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3L1P16619 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL3L1P16619 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL3L1P16619 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.32□□□□□ -0.44
CCL3L1P16619 AP000812.2-201ENST00000538934 718 ntBASIC12.32□□□□□ -0.44
CCL3L1P16619 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL3L1P16619 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 AC106820.3-201ENST00000561653 397 ntBASIC12.32□□□□□ -0.44
CCL3L1P16619 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 AC138696.2-201ENST00000607376 223 ntBASIC12.32□□□□□ -0.44
CCL3L1P16619 AC017083.2-201ENST00000608069 979 ntBASIC12.32□□□□□ -0.44
CCL3L1P16619 AC006453.4-201ENST00000636949 1252 ntBASIC12.32□□□□□ -0.44
CCL3L1P16619 LINC00552-201ENST00000625151 2579 ntBASIC12.32□□□□□ -0.44
CCL3L1P16619 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3L1P16619 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.32□□□□□ -0.44
CCL3L1P16619 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CCL3L1P16619 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3L1P16619 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL3L1P16619 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
CCL3L1P16619 AL138725.1-201ENST00000407347 1314 ntBASIC12.32□□□□□ -0.44
CCL3L1P16619 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL3L1P16619 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL3L1P16619 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3L1P16619 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3L1P16619 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3L1P16619 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3L1P16619 AC139749.1-202ENST00000617529 3139 ntBASIC12.31□□□□□ -0.44
CCL3L1P16619 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3L1P16619 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CCL3L1P16619 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.31□□□□□ -0.44
CCL3L1P16619 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3L1P16619 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.31□□□□□ -0.44
CCL3L1P16619 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3L1P16619 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCL3L1P16619 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.31□□□□□ -0.44
CCL3L1P16619 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms