Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.89□□□□□ -0.19
UBL4AP11441 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.89□□□□□ -0.19
UBL4AP11441 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.89□□□□□ -0.19
UBL4AP11441 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.89□□□□□ -0.19
UBL4AP11441 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
UBL4AP11441 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 CES1P1-201ENST00000421606 1704 ntBASIC13.89□□□□□ -0.19
UBL4AP11441 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
UBL4AP11441 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.89□□□□□ -0.19
UBL4AP11441 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.89□□□□□ -0.19
UBL4AP11441 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
UBL4AP11441 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBL4AP11441 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.88□□□□□ -0.19
UBL4AP11441 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
UBL4AP11441 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.88□□□□□ -0.19
UBL4AP11441 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.88□□□□□ -0.19
UBL4AP11441 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
UBL4AP11441 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.88□□□□□ -0.19
UBL4AP11441 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.88□□□□□ -0.19
UBL4AP11441 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
UBL4AP11441 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.88□□□□□ -0.19
UBL4AP11441 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
UBL4AP11441 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.88□□□□□ -0.19
UBL4AP11441 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.88□□□□□ -0.19
UBL4AP11441 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.88□□□□□ -0.19
UBL4AP11441 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.88□□□□□ -0.19
UBL4AP11441 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.88□□□□□ -0.19
UBL4AP11441 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.88□□□□□ -0.19
UBL4AP11441 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.88□□□□□ -0.19
UBL4AP11441 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.88□□□□□ -0.19
UBL4AP11441 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.88□□□□□ -0.19
UBL4AP11441 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.88□□□□□ -0.19
UBL4AP11441 AL603764.1-201ENST00000636452 321 ntBASIC13.88□□□□□ -0.19
UBL4AP11441 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.88□□□□□ -0.19
UBL4AP11441 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
UBL4AP11441 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBL4AP11441 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 AC055811.4-201ENST00000624039 1754 ntBASIC13.87□□□□□ -0.19
UBL4AP11441 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 AC098614.1-201ENST00000368528 745 ntBASIC13.87□□□□□ -0.19
UBL4AP11441 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBL4AP11441 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
UBL4AP11441 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
UBL4AP11441 ACTBP8-201ENST00000403258 1108 ntBASIC13.87□□□□□ -0.19
UBL4AP11441 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.87□□□□□ -0.19
UBL4AP11441 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.87□□□□□ -0.19
UBL4AP11441 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms