Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.36■□□□□ 0.21
CLTAP09496 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.36■□□□□ 0.21
CLTAP09496 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.36■□□□□ 0.21
CLTAP09496 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLTAP09496 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.36■□□□□ 0.21
CLTAP09496 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.36■□□□□ 0.21
CLTAP09496 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.36■□□□□ 0.21
CLTAP09496 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CLTAP09496 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLTAP09496 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.35■□□□□ 0.21
CLTAP09496 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CLTAP09496 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.35■□□□□ 0.21
CLTAP09496 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.35■□□□□ 0.21
CLTAP09496 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLTAP09496 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.35■□□□□ 0.21
CLTAP09496 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.35■□□□□ 0.21
CLTAP09496 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.35■□□□□ 0.21
CLTAP09496 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CLTAP09496 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 AC106820.3-201ENST00000561653 397 ntBASIC16.35■□□□□ 0.21
CLTAP09496 C2orf69P2-201ENST00000562032 1123 ntBASIC16.35■□□□□ 0.21
CLTAP09496 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.35■□□□□ 0.21
CLTAP09496 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.35■□□□□ 0.21
CLTAP09496 OR10B1P-201ENST00000601666 907 ntBASIC16.35■□□□□ 0.21
CLTAP09496 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLTAP09496 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 AC007292.2-201ENST00000593524 1812 ntBASIC16.35■□□□□ 0.21
CLTAP09496 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CLTAP09496 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CLTAP09496 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLTAP09496 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 AC023090.2-201ENST00000625182 2110 ntBASIC16.34■□□□□ 0.21
CLTAP09496 OR2I1P-209ENST00000641730 5365 ntBASIC16.34■□□□□ 0.21
CLTAP09496 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.34■□□□□ 0.21
CLTAP09496 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CLTAP09496 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CLTAP09496 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.34■□□□□ 0.21
CLTAP09496 AL391280.1-201ENST00000506969 1062 ntBASIC16.34■□□□□ 0.21
CLTAP09496 COX5BP1-201ENST00000507622 393 ntBASIC16.34■□□□□ 0.21
CLTAP09496 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 AC010328.2-201ENST00000597698 1111 ntBASIC16.34■□□□□ 0.21
CLTAP09496 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.34■□□□□ 0.21
CLTAP09496 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.34■□□□□ 0.21
CLTAP09496 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 FKBP4P6-201ENST00000457486 1332 ntBASIC16.34■□□□□ 0.21
CLTAP09496 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLTAP09496 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms