Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 TARDBPP1-201ENST00000442013 1203 ntBASIC17.08■□□□□ 0.32
TPM2P07951 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM2P07951 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
TPM2P07951 SLED1-202ENST00000512051 380 ntBASIC17.08■□□□□ 0.32
TPM2P07951 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.08■□□□□ 0.32
TPM2P07951 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.08■□□□□ 0.32
TPM2P07951 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TPM2P07951 MIR4469-201ENST00000583919 79 ntBASIC17.08■□□□□ 0.32
TPM2P07951 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM2P07951 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM2P07951 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TPM2P07951 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM2P07951 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM2P07951 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM2P07951 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM2P07951 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM2P07951 ACE3P-201ENST00000423435 1973 ntBASIC17.08■□□□□ 0.32
TPM2P07951 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM2P07951 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TPM2P07951 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM2P07951 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM2P07951 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.07■□□□□ 0.32
TPM2P07951 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TPM2P07951 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TPM2P07951 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TPM2P07951 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TPM2P07951 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM2P07951 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM2P07951 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 AC004461.1-201ENST00000412461 403 ntBASIC17.07■□□□□ 0.32
TPM2P07951 SPDYE7P-202ENST00000420373 878 ntBASIC17.07■□□□□ 0.32
TPM2P07951 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.07■□□□□ 0.32
TPM2P07951 HIST3H2BA-201ENST00000436555 524 ntBASIC17.07■□□□□ 0.32
TPM2P07951 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.07■□□□□ 0.32
TPM2P07951 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM2P07951 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.07■□□□□ 0.32
TPM2P07951 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.07■□□□□ 0.32
TPM2P07951 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 AC011467.4-201ENST00000594891 528 ntBASIC17.07■□□□□ 0.32
TPM2P07951 MIR6080-201ENST00000617359 66 ntBASIC17.07■□□□□ 0.32
TPM2P07951 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC17.07■□□□□ 0.32
TPM2P07951 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.07■□□□□ 0.32
TPM2P07951 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPM2P07951 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.07■□□□□ 0.32
TPM2P07951 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TPM2P07951 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TPM2P07951 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TPM2P07951 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TPM2P07951 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM2P07951 GHSR-202ENST00000427970 912 ntBASIC17.06■□□□□ 0.32
TPM2P07951 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.06■□□□□ 0.32
TPM2P07951 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 AC026150.2-201ENST00000564693 1156 ntBASIC17.06■□□□□ 0.32
TPM2P07951 AL133215.2-201ENST00000609242 977 ntBASIC17.06■□□□□ 0.32
TPM2P07951 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.06■□□□□ 0.32
TPM2P07951 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.06■□□□□ 0.32
TPM2P07951 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TPM2P07951 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM2P07951 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.06■□□□□ 0.32
TPM2P07951 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TPM2P07951 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TPM2P07951 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms