Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.6■□□□□ 0.09
RB1P06400 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RB1P06400 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.59■□□□□ 0.09
RB1P06400 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.59■□□□□ 0.09
RB1P06400 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
RB1P06400 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.59■□□□□ 0.09
RB1P06400 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
RB1P06400 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.59■□□□□ 0.09
RB1P06400 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
RB1P06400 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RB1P06400 AC234644.1-201ENST00000406065 370 ntBASIC15.59■□□□□ 0.09
RB1P06400 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.59■□□□□ 0.09
RB1P06400 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.59■□□□□ 0.09
RB1P06400 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.59■□□□□ 0.09
RB1P06400 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RB1P06400 MIR3180-2-201ENST00000581748 88 ntBASIC15.59■□□□□ 0.09
RB1P06400 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.59■□□□□ 0.09
RB1P06400 AC138466.4-201ENST00000623965 852 ntBASIC15.59■□□□□ 0.09
RB1P06400 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.59■□□□□ 0.09
RB1P06400 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
RB1P06400 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.59■□□□□ 0.09
RB1P06400 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RB1P06400 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.59■□□□□ 0.09
RB1P06400 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 AC009093.10-201ENST00000641956 1442 ntBASIC15.59■□□□□ 0.09
RB1P06400 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RB1P06400 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RB1P06400 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RB1P06400 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.58■□□□□ 0.09
RB1P06400 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RB1P06400 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RB1P06400 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RB1P06400 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.58■□□□□ 0.09
RB1P06400 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.58■□□□□ 0.08
RB1P06400 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RB1P06400 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RB1P06400 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.58■□□□□ 0.08
RB1P06400 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.58■□□□□ 0.08
RB1P06400 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RB1P06400 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.58■□□□□ 0.08
RB1P06400 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
RB1P06400 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.58■□□□□ 0.08
RB1P06400 OR2R1P-201ENST00000441404 914 ntBASIC15.58■□□□□ 0.08
RB1P06400 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.58■□□□□ 0.08
RB1P06400 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.58■□□□□ 0.08
RB1P06400 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.58■□□□□ 0.08
RB1P06400 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.58■□□□□ 0.08
RB1P06400 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.58■□□□□ 0.08
RB1P06400 AL022334.2-201ENST00000610000 484 ntBASIC15.58■□□□□ 0.08
RB1P06400 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.58■□□□□ 0.08
RB1P06400 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RB1P06400 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
RB1P06400 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.58■□□□□ 0.08
RB1P06400 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RB1P06400 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RB1P06400 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RB1P06400 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
RB1P06400 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.58■□□□□ 0.08
RB1P06400 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.58■□□□□ 0.08
RB1P06400 AC008741.2-201ENST00000612792 3115 ntBASIC15.58■□□□□ 0.08
RB1P06400 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RB1P06400 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RB1P06400 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RB1P06400 AP000845.1-201ENST00000581677 2131 ntBASIC15.58■□□□□ 0.08
RB1P06400 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.58■□□□□ 0.08
RB1P06400 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RB1P06400 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RB1P06400 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.57■□□□□ 0.08
RB1P06400 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.57■□□□□ 0.08
RB1P06400 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RB1P06400 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RB1P06400 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms