Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LINC00265-2P-201ENST00000413372 782 ntBASIC19.03■□□□□ 0.64
COL5A2P05997 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL5A2P05997 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC19.03■□□□□ 0.64
COL5A2P05997 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC19.03■□□□□ 0.64
COL5A2P05997 RN7SL788P-201ENST00000460504 316 ntBASIC19.03■□□□□ 0.64
COL5A2P05997 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC19.03■□□□□ 0.64
COL5A2P05997 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.03■□□□□ 0.64
COL5A2P05997 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL5A2P05997 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL5A2P05997 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.03■□□□□ 0.64
COL5A2P05997 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL5A2P05997 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
COL5A2P05997 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC19.03■□□□□ 0.64
COL5A2P05997 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL5A2P05997 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC19.03■□□□□ 0.64
COL5A2P05997 AL109809.1-201ENST00000418979 1367 ntBASIC19.03■□□□□ 0.64
COL5A2P05997 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL5A2P05997 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
COL5A2P05997 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL5A2P05997 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL5A2P05997 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL5A2P05997 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC19.03■□□□□ 0.64
COL5A2P05997 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.03■□□□□ 0.64
COL5A2P05997 BPIFB5P-201ENST00000457066 1099 ntBASIC19.03■□□□□ 0.64
COL5A2P05997 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
COL5A2P05997 AC083801.1-201ENST00000491689 358 ntBASIC19.03■□□□□ 0.64
COL5A2P05997 ALG1L3P-201ENST00000503331 765 ntBASIC19.03■□□□□ 0.64
COL5A2P05997 KRT18P37-201ENST00000520711 1282 ntBASIC19.03■□□□□ 0.64
COL5A2P05997 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL5A2P05997 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC19.03■□□□□ 0.64
COL5A2P05997 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC19.03■□□□□ 0.64
COL5A2P05997 SNORD3B-1-201ENST00000577988 758 ntBASIC19.03■□□□□ 0.64
COL5A2P05997 MME-218ENST00000625667 363 ntTSL 5 BASIC19.03■□□□□ 0.64
COL5A2P05997 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL5A2P05997 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL5A2P05997 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.02■□□□□ 0.64
COL5A2P05997 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.02■□□□□ 0.64
COL5A2P05997 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL5A2P05997 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
COL5A2P05997 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL5A2P05997 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL5A2P05997 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL5A2P05997 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL5A2P05997 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
COL5A2P05997 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC19.02■□□□□ 0.63
COL5A2P05997 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC19.02■□□□□ 0.63
COL5A2P05997 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.02■□□□□ 0.63
COL5A2P05997 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC19.02■□□□□ 0.63
COL5A2P05997 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC19.02■□□□□ 0.63
COL5A2P05997 GAS7-216ENST00000583882 553 ntTSL 5 BASIC19.02■□□□□ 0.63
COL5A2P05997 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC19.02■□□□□ 0.63
COL5A2P05997 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL5A2P05997 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
COL5A2P05997 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC19.02■□□□□ 0.63
COL5A2P05997 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
COL5A2P05997 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL5A2P05997 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL5A2P05997 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC19.01■□□□□ 0.63
COL5A2P05997 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
COL5A2P05997 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 MSANTD2P1-201ENST00000445341 1368 ntBASIC19.01■□□□□ 0.63
COL5A2P05997 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.01■□□□□ 0.63
COL5A2P05997 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 ODCP-201ENST00000459650 1639 ntBASIC19.01■□□□□ 0.63
COL5A2P05997 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.01■□□□□ 0.63
COL5A2P05997 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.01■□□□□ 0.63
COL5A2P05997 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC19.01■□□□□ 0.63
COL5A2P05997 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC19.01■□□□□ 0.63
COL5A2P05997 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC19.01■□□□□ 0.63
COL5A2P05997 AC025186.1-201ENST00000478174 870 ntBASIC19.01■□□□□ 0.63
COL5A2P05997 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC19.01■□□□□ 0.63
COL5A2P05997 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC19.01■□□□□ 0.63
COL5A2P05997 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC19.01■□□□□ 0.63
COL5A2P05997 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
COL5A2P05997 VENTXP3-201ENST00000546480 773 ntBASIC19.01■□□□□ 0.63
COL5A2P05997 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL5A2P05997 AL132994.1-201ENST00000554098 400 ntBASIC19.01■□□□□ 0.63
COL5A2P05997 GOLGA2P7-209ENST00000560408 745 ntBASIC19.01■□□□□ 0.63
COL5A2P05997 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC19.01■□□□□ 0.63
COL5A2P05997 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms