Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
POLR3DP05423 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
POLR3DP05423 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
POLR3DP05423 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
POLR3DP05423 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.82■□□□□ 0.44
POLR3DP05423 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.82■□□□□ 0.44
POLR3DP05423 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.82■□□□□ 0.44
POLR3DP05423 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.82■□□□□ 0.44
POLR3DP05423 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.82■□□□□ 0.44
POLR3DP05423 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.82■□□□□ 0.44
POLR3DP05423 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.82■□□□□ 0.44
POLR3DP05423 AC138696.2-201ENST00000607376 223 ntBASIC17.82■□□□□ 0.44
POLR3DP05423 AC002472.3-201ENST00000640124 621 ntBASIC17.82■□□□□ 0.44
POLR3DP05423 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
POLR3DP05423 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
POLR3DP05423 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
POLR3DP05423 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 AL133338.1-201ENST00000565695 1517 ntBASIC17.82■□□□□ 0.44
POLR3DP05423 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.82■□□□□ 0.44
POLR3DP05423 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
POLR3DP05423 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
POLR3DP05423 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR3DP05423 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR3DP05423 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR3DP05423 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR3DP05423 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR3DP05423 POM121L10P-201ENST00000436994 1285 ntBASIC17.81■□□□□ 0.44
POLR3DP05423 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.81■□□□□ 0.44
POLR3DP05423 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR3DP05423 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR3DP05423 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
POLR3DP05423 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.81■□□□□ 0.44
POLR3DP05423 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 AC009093.2-202ENST00000620513 2079 ntBASIC17.81■□□□□ 0.44
POLR3DP05423 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
POLR3DP05423 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.81■□□□□ 0.44
POLR3DP05423 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
POLR3DP05423 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
POLR3DP05423 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR3DP05423 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
POLR3DP05423 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
POLR3DP05423 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.8■□□□□ 0.44
POLR3DP05423 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
POLR3DP05423 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR3DP05423 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR3DP05423 AC004898.1-201ENST00000451057 766 ntBASIC17.8■□□□□ 0.44
POLR3DP05423 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.8■□□□□ 0.44
POLR3DP05423 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.8■□□□□ 0.44
POLR3DP05423 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.8■□□□□ 0.44
POLR3DP05423 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.8■□□□□ 0.44
POLR3DP05423 AL136301.1-201ENST00000615830 422 ntBASIC17.8■□□□□ 0.44
POLR3DP05423 AC018735.1-201ENST00000437208 1502 ntBASIC17.8■□□□□ 0.44
POLR3DP05423 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 AC013726.1-201ENST00000563747 2285 ntBASIC17.8■□□□□ 0.44
POLR3DP05423 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 FGD5P1-202ENST00000614866 2498 ntBASIC17.8■□□□□ 0.44
POLR3DP05423 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR3DP05423 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR3DP05423 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.8■□□□□ 0.44
POLR3DP05423 PCDHA3-202ENST00000532566 4594 ntBASIC17.8■□□□□ 0.44
POLR3DP05423 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR3DP05423 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms