Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
APOBP04114 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC8.94□□□□□ -0.98
APOBP04114 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
APOBP04114 AC133141.1-201ENST00000443015 339 ntBASIC8.94□□□□□ -0.98
APOBP04114 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC8.94□□□□□ -0.98
APOBP04114 MIR2278-201ENST00000516344 96 ntBASIC8.94□□□□□ -0.98
APOBP04114 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC8.94□□□□□ -0.98
APOBP04114 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 AL365181.1-201ENST00000564032 1828 ntBASIC8.94□□□□□ -0.98
APOBP04114 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC8.94□□□□□ -0.98
APOBP04114 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC8.94□□□□□ -0.98
APOBP04114 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
APOBP04114 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC8.93□□□□□ -0.98
APOBP04114 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC8.93□□□□□ -0.98
APOBP04114 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC8.93□□□□□ -0.98
APOBP04114 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 MROH4P-201ENST00000431302 1578 ntBASIC8.93□□□□□ -0.98
APOBP04114 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
APOBP04114 AL356000.1-201ENST00000441073 1238 ntBASIC8.93□□□□□ -0.98
APOBP04114 AL773545.2-201ENST00000442149 472 ntBASIC8.93□□□□□ -0.98
APOBP04114 RN7SL788P-201ENST00000460504 316 ntBASIC8.93□□□□□ -0.98
APOBP04114 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC8.93□□□□□ -0.98
APOBP04114 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC8.93□□□□□ -0.98
APOBP04114 AC090386.2-201ENST00000623010 1039 ntBASIC8.93□□□□□ -0.98
APOBP04114 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 PDXDC2P-206ENST00000534700 1315 ntBASIC8.93□□□□□ -0.98
APOBP04114 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 GGTLC4P-201ENST00000402176 664 ntBASIC8.93□□□□□ -0.98
APOBP04114 RHOQP2-201ENST00000449922 579 ntBASIC8.93□□□□□ -0.98
APOBP04114 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 AC126755.5-201ENST00000622756 267 ntBASIC8.93□□□□□ -0.98
APOBP04114 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
APOBP04114 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
APOBP04114 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
APOBP04114 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms