Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.79□□□□□ -0.52
TRGV3P03979 TPM3P8-201ENST00000330554 643 ntBASIC11.79□□□□□ -0.52
TRGV3P03979 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.79□□□□□ -0.52
TRGV3P03979 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 AC016694.1-201ENST00000434179 700 ntBASIC11.79□□□□□ -0.52
TRGV3P03979 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.79□□□□□ -0.52
TRGV3P03979 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.79□□□□□ -0.52
TRGV3P03979 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.79□□□□□ -0.52
TRGV3P03979 DUX4L47-201ENST00000566374 394 ntBASIC11.79□□□□□ -0.52
TRGV3P03979 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.79□□□□□ -0.52
TRGV3P03979 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV3P03979 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.79□□□□□ -0.52
TRGV3P03979 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TRGV3P03979 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV3P03979 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TRGV3P03979 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV3P03979 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV3P03979 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TRGV3P03979 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
TRGV3P03979 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV3P03979 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV3P03979 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV3P03979 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRGV3P03979 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.78□□□□□ -0.52
TRGV3P03979 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV3P03979 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV3P03979 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV3P03979 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.78□□□□□ -0.52
TRGV3P03979 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV3P03979 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
TRGV3P03979 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TRGV3P03979 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV3P03979 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV3P03979 AC026434.2-201ENST00000506094 1078 ntBASIC11.78□□□□□ -0.52
TRGV3P03979 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms