Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 TCAM1P-207ENST00000485295 1537 ntBASIC13.36□□□□□ -0.27
APOA1P02647 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.36□□□□□ -0.27
APOA1P02647 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.36□□□□□ -0.27
APOA1P02647 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.36□□□□□ -0.27
APOA1P02647 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 AC105233.2-201ENST00000523697 349 ntBASIC13.36□□□□□ -0.27
APOA1P02647 AF228730.5-201ENST00000530288 346 ntBASIC13.36□□□□□ -0.27
APOA1P02647 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.36□□□□□ -0.27
APOA1P02647 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.36□□□□□ -0.27
APOA1P02647 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 AC023794.5-201ENST00000564380 2157 ntBASIC13.36□□□□□ -0.27
APOA1P02647 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
APOA1P02647 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
APOA1P02647 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOA1P02647 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.36□□□□□ -0.27
APOA1P02647 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
APOA1P02647 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 AC011481.3-201ENST00000623895 5594 ntBASIC13.35□□□□□ -0.27
APOA1P02647 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
APOA1P02647 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.35□□□□□ -0.27
APOA1P02647 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
APOA1P02647 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.35□□□□□ -0.27
APOA1P02647 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.35□□□□□ -0.27
APOA1P02647 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOA1P02647 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
APOA1P02647 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 AKR1C7P-201ENST00000305623 895 ntBASIC13.35□□□□□ -0.27
APOA1P02647 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.35□□□□□ -0.27
APOA1P02647 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 RHOQP3-201ENST00000437982 621 ntBASIC13.35□□□□□ -0.27
APOA1P02647 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.35□□□□□ -0.27
APOA1P02647 VN2R19P-201ENST00000442399 1052 ntBASIC13.35□□□□□ -0.27
APOA1P02647 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.35□□□□□ -0.27
APOA1P02647 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 AC022447.6-201ENST00000515522 438 ntBASIC13.35□□□□□ -0.27
APOA1P02647 AF238378.1-201ENST00000526806 358 ntBASIC13.35□□□□□ -0.27
APOA1P02647 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.35□□□□□ -0.27
APOA1P02647 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.35□□□□□ -0.27
APOA1P02647 AC087388.1-201ENST00000571370 1112 ntBASIC13.35□□□□□ -0.27
APOA1P02647 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
APOA1P02647 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.35□□□□□ -0.27
APOA1P02647 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
APOA1P02647 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.35□□□□□ -0.27
APOA1P02647 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.35□□□□□ -0.27
APOA1P02647 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
APOA1P02647 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC13.35□□□□□ -0.27
APOA1P02647 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms