Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.36■□□□□ 0.21
CD4P01730 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD4P01730 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CD4P01730 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.36■□□□□ 0.21
CD4P01730 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD4P01730 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD4P01730 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CD4P01730 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.35■□□□□ 0.21
CD4P01730 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CD4P01730 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD4P01730 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD4P01730 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD4P01730 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD4P01730 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.35■□□□□ 0.21
CD4P01730 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD4P01730 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD4P01730 AC144522.1-201ENST00000625111 1658 ntBASIC16.35■□□□□ 0.21
CD4P01730 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.35■□□□□ 0.21
CD4P01730 AP000356.3-201ENST00000382243 753 ntBASIC16.35■□□□□ 0.21
CD4P01730 KRT18P66-201ENST00000452970 1269 ntBASIC16.35■□□□□ 0.21
CD4P01730 AC006122.1-201ENST00000493323 440 ntBASIC16.35■□□□□ 0.21
CD4P01730 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.35■□□□□ 0.21
CD4P01730 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CD4P01730 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.35■□□□□ 0.21
CD4P01730 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.35■□□□□ 0.21
CD4P01730 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.35■□□□□ 0.21
CD4P01730 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.35■□□□□ 0.21
CD4P01730 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.35■□□□□ 0.21
CD4P01730 AC027601.3-201ENST00000622907 509 ntBASIC16.35■□□□□ 0.21
CD4P01730 AC009084.3-201ENST00000623356 437 ntBASIC16.35■□□□□ 0.21
CD4P01730 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.35■□□□□ 0.21
CD4P01730 AC022532.1-201ENST00000624563 1728 ntBASIC16.35■□□□□ 0.21
CD4P01730 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.35■□□□□ 0.21
CD4P01730 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD4P01730 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD4P01730 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.35■□□□□ 0.21
CD4P01730 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.35■□□□□ 0.21
CD4P01730 AL359258.3-201ENST00000622910 2331 ntBASIC16.35■□□□□ 0.21
CD4P01730 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CD4P01730 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD4P01730 AL513477.1-201ENST00000602865 2407 ntBASIC16.35■□□□□ 0.21
CD4P01730 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD4P01730 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.35■□□□□ 0.21
CD4P01730 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CD4P01730 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CD4P01730 AL596257.1-201ENST00000641463 2694 ntBASIC16.34■□□□□ 0.21
CD4P01730 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CD4P01730 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.34■□□□□ 0.21
CD4P01730 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.34■□□□□ 0.21
CD4P01730 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CD4P01730 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.34■□□□□ 0.21
CD4P01730 AL645933.1-201ENST00000440087 609 ntBASIC16.34■□□□□ 0.21
CD4P01730 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.34■□□□□ 0.21
CD4P01730 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.34■□□□□ 0.21
CD4P01730 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.34■□□□□ 0.21
CD4P01730 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.34■□□□□ 0.21
CD4P01730 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.34■□□□□ 0.21
CD4P01730 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.34■□□□□ 0.21
CD4P01730 PHBP15-201ENST00000574228 665 ntBASIC16.34■□□□□ 0.21
CD4P01730 RPL17P45-201ENST00000586289 509 ntBASIC16.34■□□□□ 0.21
CD4P01730 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CD4P01730 AC005632.3-201ENST00000605544 308 ntBASIC16.34■□□□□ 0.21
CD4P01730 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.34■□□□□ 0.21
CD4P01730 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.34■□□□□ 0.21
CD4P01730 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 FRMPD2B-201ENST00000431305 1347 ntBASIC16.34■□□□□ 0.21
CD4P01730 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.34■□□□□ 0.21
CD4P01730 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CD4P01730 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.34■□□□□ 0.21
CD4P01730 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CD4P01730 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CD4P01730 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 CYP4F23P-201ENST00000593402 1579 ntBASIC16.34■□□□□ 0.21
CD4P01730 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CD4P01730 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD4P01730 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.34■□□□□ 0.21
CD4P01730 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.33■□□□□ 0.21
CD4P01730 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD4P01730 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD4P01730 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD4P01730 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CD4P01730 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD4P01730 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CD4P01730 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.33■□□□□ 0.21
CD4P01730 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms