Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
GPC4O75487 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
GPC4O75487 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
GPC4O75487 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GPC4O75487 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GPC4O75487 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.03■□□□□ -0
GPC4O75487 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.03■□□□□ -0
GPC4O75487 NUS1P3-201ENST00000423502 862 ntBASIC15.03■□□□□ -0
GPC4O75487 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.03■□□□□ -0
GPC4O75487 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.03■□□□□ -0
GPC4O75487 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.03■□□□□ -0
GPC4O75487 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.03■□□□□ -0
GPC4O75487 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.03■□□□□ -0
GPC4O75487 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.03■□□□□ -0
GPC4O75487 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.03■□□□□ -0
GPC4O75487 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.03■□□□□ -0
GPC4O75487 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.03■□□□□ -0
GPC4O75487 BX539320.1-201ENST00000623759 877 ntBASIC15.03■□□□□ -0
GPC4O75487 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.03■□□□□ -0
GPC4O75487 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.03■□□□□ -0
GPC4O75487 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.03■□□□□ -0
GPC4O75487 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
GPC4O75487 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.03■□□□□ -0
GPC4O75487 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GPC4O75487 AL158070.2-201ENST00000623713 1621 ntBASIC15.03■□□□□ -0
GPC4O75487 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
GPC4O75487 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
GPC4O75487 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 LINC01230-201ENST00000625222 3017 ntBASIC15.02■□□□□ -0
GPC4O75487 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 AL360270.3-201ENST00000609118 1348 ntBASIC15.02■□□□□ -0
GPC4O75487 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.02■□□□□ -0
GPC4O75487 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
GPC4O75487 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.02■□□□□ -0
GPC4O75487 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.02■□□□□ -0
GPC4O75487 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.02■□□□□ -0
GPC4O75487 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.02■□□□□ -0
GPC4O75487 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.02■□□□□ -0
GPC4O75487 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.02■□□□□ -0
GPC4O75487 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GPC4O75487 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.02■□□□□ -0
GPC4O75487 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.02■□□□□ -0
GPC4O75487 AC027307.3-201ENST00000594262 1100 ntBASIC15.02■□□□□ -0
GPC4O75487 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
GPC4O75487 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.02■□□□□ -0
GPC4O75487 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.02■□□□□ -0
GPC4O75487 AC005252.2-201ENST00000624630 1141 ntBASIC15.02■□□□□ -0
GPC4O75487 AL033527.5-201ENST00000641382 801 ntBASIC15.02■□□□□ -0
GPC4O75487 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
GPC4O75487 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.02□□□□□ -0.01
GPC4O75487 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
GPC4O75487 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
GPC4O75487 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.02□□□□□ -0.01
GPC4O75487 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GPC4O75487 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
GPC4O75487 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GPC4O75487 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.01□□□□□ -0.01
GPC4O75487 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
GPC4O75487 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms