Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.23□□□□□ -0.45
SSSCA1O60232 AL360270.3-201ENST00000609118 1348 ntBASIC12.23□□□□□ -0.45
SSSCA1O60232 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 AL592309.1-201ENST00000443127 649 ntBASIC12.23□□□□□ -0.45
SSSCA1O60232 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.23□□□□□ -0.45
SSSCA1O60232 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 AC069335.1-201ENST00000489972 472 ntBASIC12.23□□□□□ -0.45
SSSCA1O60232 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.23□□□□□ -0.45
SSSCA1O60232 AC104692.2-201ENST00000603054 253 ntBASIC12.23□□□□□ -0.45
SSSCA1O60232 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
SSSCA1O60232 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.23□□□□□ -0.45
SSSCA1O60232 AC055717.3-201ENST00000622967 595 ntBASIC12.23□□□□□ -0.45
SSSCA1O60232 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.23□□□□□ -0.45
SSSCA1O60232 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SSSCA1O60232 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SSSCA1O60232 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 FP325330.2-201ENST00000624219 5630 ntBASIC12.22□□□□□ -0.45
SSSCA1O60232 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SSSCA1O60232 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.22□□□□□ -0.45
SSSCA1O60232 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 AC015922.1-201ENST00000421102 1152 ntBASIC12.22□□□□□ -0.45
SSSCA1O60232 MTND6P24-201ENST00000440466 518 ntBASIC12.22□□□□□ -0.45
SSSCA1O60232 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.22□□□□□ -0.45
SSSCA1O60232 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
SSSCA1O60232 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 AL662844.1-201ENST00000546340 181 ntBASIC12.22□□□□□ -0.45
SSSCA1O60232 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 AC003101.2-201ENST00000612557 442 ntBASIC12.22□□□□□ -0.45
SSSCA1O60232 AC018529.1-201ENST00000613063 361 ntBASIC12.22□□□□□ -0.45
SSSCA1O60232 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SSSCA1O60232 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.22□□□□□ -0.45
SSSCA1O60232 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSSCA1O60232 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SSSCA1O60232 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SSSCA1O60232 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SSSCA1O60232 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms