Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.27□□□□□ -0.12
CLOCKO15516 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CLOCKO15516 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.27□□□□□ -0.12
CLOCKO15516 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.27□□□□□ -0.12
CLOCKO15516 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.27□□□□□ -0.12
CLOCKO15516 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.27□□□□□ -0.12
CLOCKO15516 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLOCKO15516 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLOCKO15516 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.27□□□□□ -0.13
CLOCKO15516 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CLOCKO15516 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
CLOCKO15516 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 FO393414.2-201ENST00000405153 598 ntBASIC14.27□□□□□ -0.13
CLOCKO15516 AL035633.1-201ENST00000406139 838 ntBASIC14.27□□□□□ -0.13
CLOCKO15516 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.27□□□□□ -0.13
CLOCKO15516 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.27□□□□□ -0.13
CLOCKO15516 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.27□□□□□ -0.13
CLOCKO15516 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.27□□□□□ -0.13
CLOCKO15516 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.27□□□□□ -0.13
CLOCKO15516 AC015910.1-201ENST00000579400 975 ntBASIC14.27□□□□□ -0.13
CLOCKO15516 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.27□□□□□ -0.13
CLOCKO15516 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.27□□□□□ -0.13
CLOCKO15516 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
CLOCKO15516 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.27□□□□□ -0.13
CLOCKO15516 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.27□□□□□ -0.13
CLOCKO15516 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLOCKO15516 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.27□□□□□ -0.13
CLOCKO15516 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.26□□□□□ -0.13
CLOCKO15516 PEG13-201ENST00000631594 5667 ntBASIC14.26□□□□□ -0.13
CLOCKO15516 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLOCKO15516 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CLOCKO15516 AC118758.2-201ENST00000614242 2813 ntBASIC14.26□□□□□ -0.13
CLOCKO15516 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLOCKO15516 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.26□□□□□ -0.13
CLOCKO15516 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.26□□□□□ -0.13
CLOCKO15516 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.26□□□□□ -0.13
CLOCKO15516 TARDBPP1-201ENST00000442013 1203 ntBASIC14.26□□□□□ -0.13
CLOCKO15516 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLOCKO15516 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.26□□□□□ -0.13
CLOCKO15516 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.26□□□□□ -0.13
CLOCKO15516 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.26□□□□□ -0.13
CLOCKO15516 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.26□□□□□ -0.13
CLOCKO15516 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.26□□□□□ -0.13
CLOCKO15516 AC018529.1-201ENST00000613063 361 ntBASIC14.26□□□□□ -0.13
CLOCKO15516 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 AC130686.1-201ENST00000622936 2466 ntBASIC14.26□□□□□ -0.13
CLOCKO15516 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLOCKO15516 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.26□□□□□ -0.13
CLOCKO15516 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.26□□□□□ -0.13
CLOCKO15516 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLOCKO15516 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLOCKO15516 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLOCKO15516 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CLOCKO15516 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLOCKO15516 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLOCKO15516 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLOCKO15516 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.25□□□□□ -0.13
CLOCKO15516 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms