Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC003102.2-201ENST00000589195 1469 ntBASIC14.57□□□□□ -0.08
E2F3O00716 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
E2F3O00716 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 LRRC59-203ENST00000576448 1531 ntBASIC14.57□□□□□ -0.08
E2F3O00716 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
E2F3O00716 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 ACKR1-201ENST00000368121 1240 ntBASIC14.57□□□□□ -0.08
E2F3O00716 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.57□□□□□ -0.08
E2F3O00716 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 TLE1P1-201ENST00000422965 589 ntBASIC14.57□□□□□ -0.08
E2F3O00716 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.57□□□□□ -0.08
E2F3O00716 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.57□□□□□ -0.08
E2F3O00716 AC092658.1-201ENST00000505836 891 ntBASIC14.57□□□□□ -0.08
E2F3O00716 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.57□□□□□ -0.08
E2F3O00716 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.57□□□□□ -0.08
E2F3O00716 CLUHP6-201ENST00000580789 941 ntBASIC14.57□□□□□ -0.08
E2F3O00716 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.57□□□□□ -0.08
E2F3O00716 WFDC1-204ENST00000613603 549 ntBASIC14.57□□□□□ -0.08
E2F3O00716 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
E2F3O00716 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 AL928921.2-201ENST00000641325 2442 ntBASIC14.57□□□□□ -0.08
E2F3O00716 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.57□□□□□ -0.08
E2F3O00716 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
E2F3O00716 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
E2F3O00716 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
E2F3O00716 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.57□□□□□ -0.08
E2F3O00716 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
E2F3O00716 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
E2F3O00716 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
E2F3O00716 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
E2F3O00716 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
E2F3O00716 SALL4P5-201ENST00000419001 1760 ntBASIC14.56□□□□□ -0.08
E2F3O00716 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.56□□□□□ -0.08
E2F3O00716 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.56□□□□□ -0.08
E2F3O00716 AC007969.1-201ENST00000433675 447 ntBASIC14.56□□□□□ -0.08
E2F3O00716 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.56□□□□□ -0.08
E2F3O00716 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.56□□□□□ -0.08
E2F3O00716 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.56□□□□□ -0.08
E2F3O00716 SNX29P1-201ENST00000548357 1007 ntBASIC14.56□□□□□ -0.08
E2F3O00716 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
E2F3O00716 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.56□□□□□ -0.08
E2F3O00716 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
E2F3O00716 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.56□□□□□ -0.08
E2F3O00716 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.56□□□□□ -0.08
E2F3O00716 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
E2F3O00716 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
E2F3O00716 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.56□□□□□ -0.08
E2F3O00716 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
E2F3O00716 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
E2F3O00716 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
E2F3O00716 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
E2F3O00716 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
E2F3O00716 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
E2F3O00716 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
E2F3O00716 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms