Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SOX1O00570 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC15.55■□□□□ 0.08
SOX1O00570 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.55■□□□□ 0.08
SOX1O00570 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 AL008638.4-201ENST00000624792 1315 ntBASIC15.55■□□□□ 0.08
SOX1O00570 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 AP000354.1-201ENST00000396982 456 ntBASIC15.55■□□□□ 0.08
SOX1O00570 CFL1P6-201ENST00000400899 494 ntBASIC15.55■□□□□ 0.08
SOX1O00570 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 AC098934.1-203ENST00000442868 1262 ntBASIC15.55■□□□□ 0.08
SOX1O00570 CDK4P1-201ENST00000454213 828 ntBASIC15.55■□□□□ 0.08
SOX1O00570 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.55■□□□□ 0.08
SOX1O00570 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC15.55■□□□□ 0.08
SOX1O00570 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SOX1O00570 MYL6-215ENST00000549566 685 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.55■□□□□ 0.08
SOX1O00570 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.55■□□□□ 0.08
SOX1O00570 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.55■□□□□ 0.08
SOX1O00570 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC15.55■□□□□ 0.08
SOX1O00570 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SOX1O00570 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SOX1O00570 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SOX1O00570 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 PRORSD1P-202ENST00000563365 2154 ntBASIC15.55■□□□□ 0.08
SOX1O00570 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.55■□□□□ 0.08
SOX1O00570 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SOX1O00570 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX1O00570 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SOX1O00570 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
SOX1O00570 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SOX1O00570 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.54■□□□□ 0.08
SOX1O00570 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SOX1O00570 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 AL050341.2-201ENST00000567508 1541 ntBASIC15.54■□□□□ 0.08
SOX1O00570 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 AC003102.2-201ENST00000589195 1469 ntBASIC15.54■□□□□ 0.08
SOX1O00570 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15.54■□□□□ 0.08
SOX1O00570 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.54■□□□□ 0.08
SOX1O00570 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SOX1O00570 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX1O00570 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SOX1O00570 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX1O00570 KRT18P4-201ENST00000422599 1288 ntBASIC15.54■□□□□ 0.08
SOX1O00570 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX1O00570 POLR2LP1-206ENST00000444785 187 ntBASIC15.54■□□□□ 0.08
SOX1O00570 B9D1-206ENST00000461069 923 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX1O00570 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC15.54■□□□□ 0.08
SOX1O00570 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.54■□□□□ 0.08
SOX1O00570 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC15.54■□□□□ 0.08
SOX1O00570 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.54■□□□□ 0.08
SOX1O00570 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX1O00570 BX088702.1-201ENST00000610784 235 ntBASIC15.54■□□□□ 0.08
SOX1O00570 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.54■□□□□ 0.08
SOX1O00570 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
SOX1O00570 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.54■□□□□ 0.08
SOX1O00570 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SOX1O00570 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SOX1O00570 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SOX1O00570 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
SOX1O00570 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SOX1O00570 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC15.53■□□□□ 0.08
SOX1O00570 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SOX1O00570 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.53■□□□□ 0.08
SOX1O00570 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SOX1O00570 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SOX1O00570 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SOX1O00570 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
SOX1O00570 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SOX1O00570 AC022211.2-201ENST00000585075 2527 ntBASIC15.53■□□□□ 0.08
SOX1O00570 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SOX1O00570 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SOX1O00570 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SOX1O00570 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms