Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDC7O00311 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.65□□□□□ -0.06
CDC7O00311 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 AC007326.2-201ENST00000624224 7579 ntBASIC14.65□□□□□ -0.06
CDC7O00311 AL138725.1-201ENST00000407347 1314 ntBASIC14.65□□□□□ -0.06
CDC7O00311 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDC7O00311 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC7O00311 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CDC7O00311 AL136172.1-201ENST00000598590 1394 ntBASIC14.64□□□□□ -0.07
CDC7O00311 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDC7O00311 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC7O00311 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDC7O00311 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDC7O00311 RN7SKP230-201ENST00000365642 335 ntBASIC14.64□□□□□ -0.07
CDC7O00311 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDC7O00311 ACTG1P3-201ENST00000431775 1114 ntBASIC14.64□□□□□ -0.07
CDC7O00311 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 TDH-203ENST00000531764 1110 ntBASIC14.64□□□□□ -0.07
CDC7O00311 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.64□□□□□ -0.07
CDC7O00311 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDC7O00311 AC010319.3-201ENST00000597028 470 ntBASIC14.64□□□□□ -0.07
CDC7O00311 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.64□□□□□ -0.07
CDC7O00311 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDC7O00311 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDC7O00311 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDC7O00311 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.64□□□□□ -0.07
CDC7O00311 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.64□□□□□ -0.07
CDC7O00311 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC7O00311 CLUHP2-201ENST00000426660 1303 ntBASIC14.64□□□□□ -0.07
CDC7O00311 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDC7O00311 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC7O00311 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDC7O00311 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 GRK6P1-201ENST00000400595 1711 ntBASIC14.63□□□□□ -0.07
CDC7O00311 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 INE2-201ENST00000630399 1874 ntBASIC14.63□□□□□ -0.07
CDC7O00311 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 AC011840.2-201ENST00000563063 1520 ntBASIC14.63□□□□□ -0.07
CDC7O00311 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDC7O00311 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
CDC7O00311 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.63□□□□□ -0.07
CDC7O00311 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDC7O00311 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC7O00311 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC7O00311 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDC7O00311 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.63□□□□□ -0.07
CDC7O00311 PTP4A1P2-201ENST00000546033 454 ntBASIC14.63□□□□□ -0.07
CDC7O00311 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.63□□□□□ -0.07
CDC7O00311 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC7O00311 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.63□□□□□ -0.07
CDC7O00311 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC7O00311 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms