Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ACKR1-201ENST00000368121 1240 ntBASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BNIP3P42-201ENST00000454982 569 ntBASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BNIP3P29-201ENST00000598302 571 ntBASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC011447.5-201ENST00000616168 564 ntBASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC138969.2-201ENST00000532739 9932 ntBASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BX640514.1-201ENST00000583223 1918 ntBASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MTHFR-210ENST00000641407 2387 ntBASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ANKRD19P-201ENST00000338192 862 ntBASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FAM21FP-201ENST00000426241 1131 ntBASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RPL7P3-201ENST00000441388 714 ntBASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FTH1P14-201ENST00000482930 551 ntBASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ST20-AS1-201ENST00000560255 4223 ntBASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms