Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 AL512638.1-201ENST00000457493 794 ntBASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 TPRX2P-201ENST00000535362 881 ntBASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 DUX4L27-201ENST00000554796 1261 ntBASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 AC008738.7-201ENST00000609744 511 ntBASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 AL662799.1-202ENST00000614205 422 ntBASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 PRSS30P-206ENST00000641773 873 ntBASIC10.21□□□□□ -0.77
LINC00959A0A1B0GUT2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 PTENP1-202ENST00000532280 3996 ntBASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00959A0A1B0GUT2 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00959A0A1B0GUT2 AL139094.1-201ENST00000405549 1188 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms