Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
BIVM-ERCC5R4GMW8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC38.81■■■■□ 3.8
BIVM-ERCC5R4GMW8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
BIVM-ERCC5R4GMW8 AC099791.1-201ENST00000416440 715 ntBASIC38.81■■■■□ 3.8
BIVM-ERCC5R4GMW8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
BIVM-ERCC5R4GMW8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
BIVM-ERCC5R4GMW8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
BIVM-ERCC5R4GMW8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC38.79■■■■□ 3.8
BIVM-ERCC5R4GMW8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC38.79■■■■□ 3.8
BIVM-ERCC5R4GMW8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC38.79■■■■□ 3.8
BIVM-ERCC5R4GMW8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
BIVM-ERCC5R4GMW8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC38.79■■■■□ 3.8
BIVM-ERCC5R4GMW8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC38.78■■■■□ 3.8
BIVM-ERCC5R4GMW8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC38.78■■■■□ 3.8
BIVM-ERCC5R4GMW8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
BIVM-ERCC5R4GMW8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC38.78■■■■□ 3.8
BIVM-ERCC5R4GMW8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC38.77■■■■□ 3.8
BIVM-ERCC5R4GMW8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
BIVM-ERCC5R4GMW8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
BIVM-ERCC5R4GMW8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC38.76■■■■□ 3.8
BIVM-ERCC5R4GMW8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC38.76■■■■□ 3.8
BIVM-ERCC5R4GMW8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC38.76■■■■□ 3.79
BIVM-ERCC5R4GMW8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC38.75■■■■□ 3.79
BIVM-ERCC5R4GMW8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC38.74■■■■□ 3.79
BIVM-ERCC5R4GMW8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC38.74■■■■□ 3.79
BIVM-ERCC5R4GMW8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
BIVM-ERCC5R4GMW8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
BIVM-ERCC5R4GMW8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
BIVM-ERCC5R4GMW8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC38.74■■■■□ 3.79
BIVM-ERCC5R4GMW8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC38.74■■■■□ 3.79
BIVM-ERCC5R4GMW8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC38.74■■■■□ 3.79
BIVM-ERCC5R4GMW8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC38.73■■■■□ 3.79
BIVM-ERCC5R4GMW8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
BIVM-ERCC5R4GMW8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
BIVM-ERCC5R4GMW8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
BIVM-ERCC5R4GMW8 AL162430.1-201ENST00000480705 870 ntBASIC38.72■■■■□ 3.79
BIVM-ERCC5R4GMW8 AC241377.3-202ENST00000626088 1088 ntBASIC38.72■■■■□ 3.79
BIVM-ERCC5R4GMW8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
BIVM-ERCC5R4GMW8 AC241585.3-202ENST00000628937 1088 ntBASIC38.72■■■■□ 3.79
BIVM-ERCC5R4GMW8 AC245100.8-202ENST00000629247 1058 ntBASIC38.72■■■■□ 3.79
BIVM-ERCC5R4GMW8 AL022069.1-201ENST00000568025 1636 ntBASIC38.72■■■■□ 3.79
BIVM-ERCC5R4GMW8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC38.71■■■■□ 3.79
BIVM-ERCC5R4GMW8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC38.71■■■■□ 3.79
BIVM-ERCC5R4GMW8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
BIVM-ERCC5R4GMW8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
BIVM-ERCC5R4GMW8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC38.71■■■■□ 3.79
BIVM-ERCC5R4GMW8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC38.71■■■■□ 3.79
BIVM-ERCC5R4GMW8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC38.71■■■■□ 3.79
BIVM-ERCC5R4GMW8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
BIVM-ERCC5R4GMW8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC38.7■■■■□ 3.79
BIVM-ERCC5R4GMW8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC38.7■■■■□ 3.79
BIVM-ERCC5R4GMW8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
BIVM-ERCC5R4GMW8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
BIVM-ERCC5R4GMW8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
BIVM-ERCC5R4GMW8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
BIVM-ERCC5R4GMW8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
BIVM-ERCC5R4GMW8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
BIVM-ERCC5R4GMW8 HES6-206ENST00000409574 738 ntTSL 2 BASIC38.67■■■■□ 3.78
BIVM-ERCC5R4GMW8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC38.67■■■■□ 3.78
BIVM-ERCC5R4GMW8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC38.67■■■■□ 3.78
BIVM-ERCC5R4GMW8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC38.67■■■■□ 3.78
BIVM-ERCC5R4GMW8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
BIVM-ERCC5R4GMW8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC38.67■■■■□ 3.78
BIVM-ERCC5R4GMW8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC38.66■■■■□ 3.78
BIVM-ERCC5R4GMW8 AC008764.7-201ENST00000593779 1081 ntBASIC38.66■■■■□ 3.78
BIVM-ERCC5R4GMW8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
BIVM-ERCC5R4GMW8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC38.65■■■■□ 3.78
BIVM-ERCC5R4GMW8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC38.65■■■■□ 3.78
BIVM-ERCC5R4GMW8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
BIVM-ERCC5R4GMW8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC38.65■■■■□ 3.78
BIVM-ERCC5R4GMW8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
BIVM-ERCC5R4GMW8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC38.64■■■■□ 3.78
BIVM-ERCC5R4GMW8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.78
BIVM-ERCC5R4GMW8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC38.63■■■■□ 3.78
BIVM-ERCC5R4GMW8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC38.63■■■■□ 3.78
BIVM-ERCC5R4GMW8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC38.63■■■■□ 3.77
BIVM-ERCC5R4GMW8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC38.63■■■■□ 3.77
BIVM-ERCC5R4GMW8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC38.63■■■■□ 3.77
BIVM-ERCC5R4GMW8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC38.63■■■■□ 3.77
BIVM-ERCC5R4GMW8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
BIVM-ERCC5R4GMW8 AC009086.3-201ENST00000623486 1008 ntBASIC38.63■■■■□ 3.77
BIVM-ERCC5R4GMW8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC38.63■■■■□ 3.77
BIVM-ERCC5R4GMW8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC38.63■■■■□ 3.77
BIVM-ERCC5R4GMW8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
BIVM-ERCC5R4GMW8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
BIVM-ERCC5R4GMW8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC38.62■■■■□ 3.77
BIVM-ERCC5R4GMW8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC38.61■■■■□ 3.77
BIVM-ERCC5R4GMW8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
BIVM-ERCC5R4GMW8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC38.61■■■■□ 3.77
BIVM-ERCC5R4GMW8 IRS3P-201ENST00000223076 1006 ntBASIC38.6■■■■□ 3.77
BIVM-ERCC5R4GMW8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC38.6■■■■□ 3.77
BIVM-ERCC5R4GMW8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
BIVM-ERCC5R4GMW8 BX842568.3-201ENST00000418104 571 ntBASIC38.6■■■■□ 3.77
BIVM-ERCC5R4GMW8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
BIVM-ERCC5R4GMW8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC38.6■■■■□ 3.77
BIVM-ERCC5R4GMW8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC38.6■■■■□ 3.77
BIVM-ERCC5R4GMW8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
BIVM-ERCC5R4GMW8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC38.59■■■■□ 3.77
BIVM-ERCC5R4GMW8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
BIVM-ERCC5R4GMW8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC38.59■■■■□ 3.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms