Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
GTF3C3Q9Y5Q9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
GTF3C3Q9Y5Q9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC30.76■■■□□ 2.52
GTF3C3Q9Y5Q9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
GTF3C3Q9Y5Q9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
GTF3C3Q9Y5Q9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC30.76■■■□□ 2.51
GTF3C3Q9Y5Q9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
GTF3C3Q9Y5Q9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC30.76■■■□□ 2.51
GTF3C3Q9Y5Q9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
GTF3C3Q9Y5Q9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
GTF3C3Q9Y5Q9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
GTF3C3Q9Y5Q9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.75■■■□□ 2.51
GTF3C3Q9Y5Q9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.75■■■□□ 2.51
GTF3C3Q9Y5Q9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
GTF3C3Q9Y5Q9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
GTF3C3Q9Y5Q9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC30.74■■■□□ 2.51
GTF3C3Q9Y5Q9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
GTF3C3Q9Y5Q9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
GTF3C3Q9Y5Q9 AC242852.2-201ENST00000615738 1807 ntBASIC30.73■■■□□ 2.51
GTF3C3Q9Y5Q9 FBXW4P1-201ENST00000426721 2239 ntBASIC30.73■■■□□ 2.51
GTF3C3Q9Y5Q9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.72■■■□□ 2.51
GTF3C3Q9Y5Q9 MIR6089-201ENST00000616698 64 ntBASIC30.72■■■□□ 2.51
GTF3C3Q9Y5Q9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
GTF3C3Q9Y5Q9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
GTF3C3Q9Y5Q9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.72■■■□□ 2.51
GTF3C3Q9Y5Q9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
GTF3C3Q9Y5Q9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
GTF3C3Q9Y5Q9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
GTF3C3Q9Y5Q9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
GTF3C3Q9Y5Q9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC30.71■■■□□ 2.51
GTF3C3Q9Y5Q9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
GTF3C3Q9Y5Q9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC30.7■■■□□ 2.51
GTF3C3Q9Y5Q9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
GTF3C3Q9Y5Q9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
GTF3C3Q9Y5Q9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
GTF3C3Q9Y5Q9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
GTF3C3Q9Y5Q9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.7■■■□□ 2.5
GTF3C3Q9Y5Q9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
GTF3C3Q9Y5Q9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
GTF3C3Q9Y5Q9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
GTF3C3Q9Y5Q9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
GTF3C3Q9Y5Q9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
GTF3C3Q9Y5Q9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
GTF3C3Q9Y5Q9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC30.69■■■□□ 2.5
GTF3C3Q9Y5Q9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
GTF3C3Q9Y5Q9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.69■■■□□ 2.5
GTF3C3Q9Y5Q9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
GTF3C3Q9Y5Q9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC30.69■■■□□ 2.5
GTF3C3Q9Y5Q9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
GTF3C3Q9Y5Q9 AC092068.2-201ENST00000590491 1708 ntBASIC30.68■■■□□ 2.5
GTF3C3Q9Y5Q9 AP002365.1-201ENST00000603448 772 ntBASIC30.68■■■□□ 2.5
GTF3C3Q9Y5Q9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
GTF3C3Q9Y5Q9 AC026310.3-201ENST00000625186 2373 ntBASIC30.68■■■□□ 2.5
GTF3C3Q9Y5Q9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
GTF3C3Q9Y5Q9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
GTF3C3Q9Y5Q9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
GTF3C3Q9Y5Q9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC30.67■■■□□ 2.5
GTF3C3Q9Y5Q9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 BID-212ENST00000614949 1988 ntTSL 5 BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GTF3C3Q9Y5Q9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
GTF3C3Q9Y5Q9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
GTF3C3Q9Y5Q9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC30.65■■■□□ 2.5
GTF3C3Q9Y5Q9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
GTF3C3Q9Y5Q9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
GTF3C3Q9Y5Q9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
GTF3C3Q9Y5Q9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
GTF3C3Q9Y5Q9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
GTF3C3Q9Y5Q9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
GTF3C3Q9Y5Q9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC30.64■■■□□ 2.5
GTF3C3Q9Y5Q9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC30.64■■■□□ 2.5
GTF3C3Q9Y5Q9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
GTF3C3Q9Y5Q9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
GTF3C3Q9Y5Q9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
GTF3C3Q9Y5Q9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
GTF3C3Q9Y5Q9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.64■■■□□ 2.5
GTF3C3Q9Y5Q9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
GTF3C3Q9Y5Q9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
GTF3C3Q9Y5Q9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
GTF3C3Q9Y5Q9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms